| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1408 |
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| Symbol | |
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| ID | 6409065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1485808 |
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| End bp | 1486698 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711307 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001990423 |
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| Protein GI | 192289818 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0788732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATCG ATACCATGTC CGAACCGACC CTTCCTGTGC CGCGCCCGAT GCGTCCGCGG
CTCGGTTTCC TGCTGTCGAC GCCGATCATC GCCGTCGCCA CCATCTGCCT GACGCTGGTC
GTACTGATGG CGATCTTCGC GCCGTGGCTG GCGCCGCACG ATCCGGTGAA GCTGGCGCCG
GCGCTGCGGC TGAAGCCGCC GAGTGCCGAA TTCCTGCTCG GCACCGACGC CTACGGCCGC
GATCTGCTGT CGCGCATCAT CTATGGCGGC CGGGTGTCGC TATTGATCGG TATCGGCTCG
GCGATCGTCG CCATCGCGAT CGGCCTCGTC ATCGGTCTGG TCGCCGGCTT CTTCCGCTGG
GTCGACGCGG TGATGATGCG GGTGATGGAC GGCTTGATGG CGATTCCCAG CGTCCTGCTG
GCGATCGCCG TAGTGTCGCT GTCCGGCGCC AGCCTGACCA CGGTGCTGAT CGCGATCACC
ATTCCGGAAA TCCCGCGGGT CGCCCGGCTG GTCCGCTCGG TAGTGCTGAC CGCGCGCGAA
GAGCCCTATG TCGAAGCCGC GATCTCAGTC GGCTCCAGCC TGCCGAAGAT CATGGTGCGG
CACCTGATGC CCAACACGGT AGCGCCGCTG ATCGTGCAGG GCACCTACAT CGCCGCCTCG
GCAATCCTCA CCGAAGCGAT CCTGTCGTTC CTCGGCGCTG GCATCAGCCC GGAGACGCCG
ACCTGGGGCA ACATCATGGC CGAAGGCCGC GCCTACTTTC AGATCAAGCC GATGCTGATC
TTCTGGCCGG GCCTCTTGCT GTCGATCGCG ATCCTGTCGG TCAACCTGAT CGGTGACGCC
GCCCGCGACG CGCTCGACCC GCGGATGAAA CAGCGCGAGG GCAGCCGATG A
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| Protein sequence | MAIDTMSEPT LPVPRPMRPR LGFLLSTPII AVATICLTLV VLMAIFAPWL APHDPVKLAP
ALRLKPPSAE FLLGTDAYGR DLLSRIIYGG RVSLLIGIGS AIVAIAIGLV IGLVAGFFRW
VDAVMMRVMD GLMAIPSVLL AIAVVSLSGA SLTTVLIAIT IPEIPRVARL VRSVVLTARE
EPYVEAAISV GSSLPKIMVR HLMPNTVAPL IVQGTYIAAS AILTEAILSF LGAGISPETP
TWGNIMAEGR AYFQIKPMLI FWPGLLLSIA ILSVNLIGDA ARDALDPRMK QREGSR
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