More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5425 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_1883  acyl-CoA dehydrogenase domain-containing protein  84.86 
 
 
388 aa  695    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5425  putative butyryl-CoA dehydrogenase  100 
 
 
384 aa  791    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3319  acyl-CoA dehydrogenase domain-containing protein  77.63 
 
 
392 aa  619  1e-176  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.788367  normal  0.160787 
 
 
-
 
NC_009511  Swit_0323  acyl-CoA dehydrogenase domain-containing protein  62.99 
 
 
384 aa  512  1e-144  Sphingomonas wittichii RW1  Bacteria  normal  0.486315  normal 
 
 
-
 
NC_007333  Tfu_1281  butyryl-CoA dehydrogenase  38.71 
 
 
387 aa  249  6e-65  Thermobifida fusca YX  Bacteria  normal  0.33384  n/a   
 
 
-
 
NC_009511  Swit_2252  acyl-CoA dehydrogenase domain-containing protein  37.66 
 
 
386 aa  243  3e-63  Sphingomonas wittichii RW1  Bacteria  normal  0.308045  normal  0.262285 
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  32.35 
 
 
379 aa  221  1.9999999999999999e-56  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  35.87 
 
 
379 aa  220  3e-56  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0092  butyryl-CoA dehydrogenase  34.3 
 
 
378 aa  218  1e-55  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_3783  acyl-CoA dehydrogenase domain protein  35.14 
 
 
378 aa  217  2.9999999999999998e-55  Haloterrigena turkmenica DSM 5511  Archaea  hitchhiker  0.00216857  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  35.33 
 
 
380 aa  215  9e-55  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  31.25 
 
 
379 aa  214  1.9999999999999998e-54  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  32.63 
 
 
380 aa  214  2.9999999999999995e-54  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  33.16 
 
 
379 aa  214  2.9999999999999995e-54  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  33.16 
 
 
379 aa  214  2.9999999999999995e-54  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1546  acyl-CoA dehydrogenase domain-containing protein  34.39 
 
 
378 aa  212  7.999999999999999e-54  Maricaulis maris MCS10  Bacteria  normal  0.295515  normal 
 
 
-
 
NC_009253  Dred_1782  butyryl-CoA dehydrogenase  34.39 
 
 
379 aa  212  1e-53  Desulfotomaculum reducens MI-1  Bacteria  normal  0.257154  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  33.97 
 
 
379 aa  210  3e-53  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  33.97 
 
 
379 aa  209  6e-53  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  34.51 
 
 
379 aa  209  7e-53  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  34.51 
 
 
379 aa  209  9e-53  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  34.51 
 
 
379 aa  208  1e-52  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  33.51 
 
 
379 aa  208  1e-52  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  34.24 
 
 
379 aa  207  3e-52  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  34.24 
 
 
379 aa  206  5e-52  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  34.24 
 
 
379 aa  206  5e-52  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1901  putative acyl-CoA dehydrogenase  33.42 
 
 
388 aa  206  6e-52  Burkholderia xenovorans LB400  Bacteria  normal  0.14325  normal 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  33.15 
 
 
379 aa  206  7e-52  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  34.78 
 
 
386 aa  204  1e-51  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  33.97 
 
 
379 aa  204  2e-51  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  33.42 
 
 
380 aa  204  2e-51  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  32.79 
 
 
379 aa  204  2e-51  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  33.7 
 
 
376 aa  204  3e-51  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3055  acyl-CoA dehydrogenase domain-containing protein  34.66 
 
 
379 aa  202  9.999999999999999e-51  Caulobacter sp. K31  Bacteria  normal  0.350853  normal 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  33.51 
 
 
376 aa  200  3.9999999999999996e-50  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  33.51 
 
 
376 aa  200  3.9999999999999996e-50  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1260  acyl-CoA dehydrogenase domain-containing protein  31.39 
 
 
394 aa  200  3.9999999999999996e-50  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.334789  normal 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  31.28 
 
 
388 aa  199  7e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  33.78 
 
 
385 aa  199  7e-50  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_009719  Plav_2898  acyl-CoA dehydrogenase domain-containing protein  34.76 
 
 
379 aa  199  7.999999999999999e-50  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.000249127 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  30.08 
 
 
379 aa  197  2.0000000000000003e-49  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  33.24 
 
 
376 aa  197  2.0000000000000003e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  33.24 
 
 
381 aa  197  2.0000000000000003e-49  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  33.24 
 
 
376 aa  197  2.0000000000000003e-49  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  33.24 
 
 
376 aa  197  3e-49  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  31.83 
 
 
381 aa  197  3e-49  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  33.24 
 
 
376 aa  197  3e-49  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3620  acyl-CoA dehydrogenase domain-containing protein  32.12 
 
 
397 aa  197  3e-49  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  32.28 
 
 
379 aa  197  3e-49  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  31.28 
 
 
388 aa  197  3e-49  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  33.24 
 
 
381 aa  197  3e-49  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  32.97 
 
 
381 aa  196  8.000000000000001e-49  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_011894  Mnod_2176  acyl-CoA dehydrogenase domain protein  34.67 
 
 
380 aa  196  8.000000000000001e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.110006  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  33.6 
 
 
380 aa  195  9e-49  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014230  CA2559_06620  butyryl-CoA dehydrogenase  32.01 
 
 
380 aa  195  9e-49  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  32.72 
 
 
381 aa  195  1e-48  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  32.98 
 
 
642 aa  195  1e-48  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  33.33 
 
 
380 aa  195  1e-48  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2026  acyl-CoA dehydrogenase domain protein  32.47 
 
 
641 aa  194  1e-48  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000211003  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  32.28 
 
 
379 aa  195  1e-48  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009616  Tmel_0656  acyl-CoA dehydrogenase domain-containing protein  28.42 
 
 
380 aa  193  3e-48  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  31.77 
 
 
383 aa  193  3e-48  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013730  Slin_5641  Butyryl-CoA dehydrogenase  34.04 
 
 
379 aa  194  3e-48  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03805  acyl-CoA dehydrogenase  34.55 
 
 
387 aa  193  3e-48  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0505  acyl-CoA dehydrogenase domain protein  32.16 
 
 
561 aa  193  4e-48  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2476  acyl-CoA dehydrogenase domain-containing protein  33.6 
 
 
380 aa  193  5e-48  Methylobacterium sp. 4-46  Bacteria  normal  0.893721  normal  0.185436 
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  32.7 
 
 
376 aa  191  1e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  33.42 
 
 
382 aa  191  2e-47  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1874  acyl-CoA dehydrogenase domain-containing protein  33.6 
 
 
387 aa  191  2e-47  Caulobacter sp. K31  Bacteria  normal  0.33835  normal 
 
 
-
 
NC_008255  CHU_3827  bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)  32.54 
 
 
379 aa  191  2e-47  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  31.03 
 
 
390 aa  190  2.9999999999999997e-47  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  31.47 
 
 
389 aa  190  4e-47  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  32.82 
 
 
389 aa  190  4e-47  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1739  isovaleryl-CoA dehydrogenase  31.23 
 
 
390 aa  190  4e-47  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  32.08 
 
 
379 aa  190  5e-47  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  33.07 
 
 
382 aa  189  5e-47  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_009523  RoseRS_0319  acyl-CoA dehydrogenase domain-containing protein  32.55 
 
 
383 aa  190  5e-47  Roseiflexus sp. RS-1  Bacteria  normal  0.339666  normal  0.0442463 
 
 
-
 
NC_009428  Rsph17025_1335  acyl-CoA dehydrogenase domain-containing protein  35.09 
 
 
379 aa  189  8e-47  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.254429  normal  0.854455 
 
 
-
 
NC_010505  Mrad2831_3784  acyl-CoA dehydrogenase domain-containing protein  34.3 
 
 
381 aa  189  9e-47  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0514629  normal  0.596674 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  30.69 
 
 
400 aa  189  9e-47  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_009441  Fjoh_0455  acyl-CoA dehydrogenase domain-containing protein  31.48 
 
 
380 aa  188  1e-46  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0202  acyl-CoA dehydrogenase domain protein  33.94 
 
 
382 aa  188  1e-46  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221874  normal 
 
 
-
 
NC_008048  Sala_3053  Acyl-CoA dehydrogenase  32.34 
 
 
381 aa  188  1e-46  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.75901 
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  32.17 
 
 
375 aa  187  2e-46  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_013061  Phep_0136  acyl-CoA dehydrogenase domain protein  33.78 
 
 
379 aa  187  2e-46  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_3822  acyl-CoA dehydrogenase domain protein  34.13 
 
 
379 aa  188  2e-46  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.962066  normal  0.565208 
 
 
-
 
NC_012803  Mlut_02820  acyl-CoA dehydrogenase  34.13 
 
 
377 aa  187  2e-46  Micrococcus luteus NCTC 2665  Bacteria  normal  0.986779  n/a   
 
 
-
 
NC_009439  Pmen_2640  acyl-CoA dehydrogenase domain-containing protein  33.06 
 
 
382 aa  187  3e-46  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000373  branched-chain acyl-CoA dehydrogenase  33.33 
 
 
384 aa  187  3e-46  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1871  acyl-CoA dehydrogenase domain-containing protein  32.63 
 
 
385 aa  187  3e-46  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1789  acyl-CoA dehydrogenase domain-containing protein  34.83 
 
 
379 aa  187  3e-46  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0858072  normal 
 
 
-
 
NC_012854  Rleg_6510  acyl-CoA dehydrogenase domain protein  33.79 
 
 
381 aa  187  4e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.41485  normal  0.721434 
 
 
-
 
NC_013757  Gobs_4353  acyl-CoA dehydrogenase domain protein  31.3 
 
 
385 aa  187  4e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  33.42 
 
 
377 aa  186  4e-46  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_013132  Cpin_6291  acyl-CoA dehydrogenase domain protein  31.4 
 
 
379 aa  187  4e-46  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  31.76 
 
 
382 aa  187  4e-46  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  31.02 
 
 
379 aa  186  5e-46  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  33.42 
 
 
377 aa  186  5e-46  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  33.42 
 
 
377 aa  186  5e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_009943  Dole_2500  acyl-CoA dehydrogenase domain-containing protein  31.93 
 
 
380 aa  186  6e-46  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
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