Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1883 |
Symbol | |
ID | 5747440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2083883 |
End bp | 2085049 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641296961 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001562908 |
Protein GI | 160897326 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCA CCCTTTCCGA AGAACACCAG GCTTTCGCCG ACAGCGTGGC CCGGTTCGCC CAGGACAAGC TGGCGGCCGG CGCACTGGAG CGTGCGCATT CCCCGCATTA CCCCTGGGAG ACTGCGAGCC TGCTGGCCGA GCAGGGCTTG CTGGGCATTG CCTTTCCCGA GGCCGACGGC GGGCAGGGCG GCTCGCTCAT GCATGCCGTG CTTGCCATCG AGCAGGTGGC CCTGGTCTGC CCCAAGAGCG CCGACATCGT GCAGGCCGGC AACTTCGGCC CCATACGCAC CTTCGTGGAG TACGCGGACG CCGCGCAGAA GGCGCGCTTC CTGCCGGATC TGCTGGCTGG AAAAAAGCTC ATTTCTCTGG GCATGACCGA GCCCGATGCA GGCTCGGCCG TGACCGAGCT GAGGACCACG GCCACGCTGG AGGGCGATCA CTATGTGATC AACGGCAGCA AGGTGTTCTC CACGCACAGC CCCGAAGCCG ACCTGTTCCT GGTCTACGTG CGCTTCGGGC CGGGCGTGGA CGGCATAGGC TCGGTGCTGG TGGAGCGCGG CACGCCCGGC GTCGAGGTCG GCCAGCCTTC GGCCTTCATG AATGGCGAGC AATGGGCGCA GCTGTATTTC GAGAACTGCC GCATTCCGCG CGAGAACGTG CTGCTGGGCG CGGGTGGATT CAAGAAGCAG ATCTCGGGCT TCAACGTGGA GCGCCTGGGC AATGCCTCGC GCGCGCTGGC GCTGGGCCGG CATGCCTTCA ACCTGGCGCG CGAGCACGCA CGGGTACGCC GCCAGTTCGG ACGCGAGCTG TGCGAGTTCC AGGGCCTGCA GTGGAAGTTC GCCGACATGT GGATGAAGCT GGAGCAGGCC CAGCTGCTGC TCTACAAGGC CGCGCTCGAG GGTGAGCATG GCCTGCCCAG CGCGCAAAGC ACGGCCATGG CCAAGCTGGC CTGCAATCTG GCGGGCTGGG AGGTGTCCAA CGAGGCCATG CAGGTCATGG GGGGCCTGGG CTTCAGCCAG GAGGCCCTGG TGGAGTACTG CGTGCGCCGC ACGCGCGGCT GGATGATCGC CGGCGGCTCC ATCGAAGTGC TCAGGAACCG CATCGCCGAG GGCGTCTTCG GGCGGACCTT CTCCCAGAAA GCCTCCCAGC CCGCACCCCG GCAGTAA
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Protein sequence | MDFTLSEEHQ AFADSVARFA QDKLAAGALE RAHSPHYPWE TASLLAEQGL LGIAFPEADG GQGGSLMHAV LAIEQVALVC PKSADIVQAG NFGPIRTFVE YADAAQKARF LPDLLAGKKL ISLGMTEPDA GSAVTELRTT ATLEGDHYVI NGSKVFSTHS PEADLFLVYV RFGPGVDGIG SVLVERGTPG VEVGQPSAFM NGEQWAQLYF ENCRIPRENV LLGAGGFKKQ ISGFNVERLG NASRALALGR HAFNLAREHA RVRRQFGREL CEFQGLQWKF ADMWMKLEQA QLLLYKAALE GEHGLPSAQS TAMAKLACNL AGWEVSNEAM QVMGGLGFSQ EALVEYCVRR TRGWMIAGGS IEVLRNRIAE GVFGRTFSQK ASQPAPRQ
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