Gene Daci_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1883 
Symbol 
ID5747440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2083883 
End bp2085049 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content67% 
IMG OID641296961 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001562908 
Protein GI160897326 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCA CCCTTTCCGA AGAACACCAG GCTTTCGCCG ACAGCGTGGC CCGGTTCGCC 
CAGGACAAGC TGGCGGCCGG CGCACTGGAG CGTGCGCATT CCCCGCATTA CCCCTGGGAG
ACTGCGAGCC TGCTGGCCGA GCAGGGCTTG CTGGGCATTG CCTTTCCCGA GGCCGACGGC
GGGCAGGGCG GCTCGCTCAT GCATGCCGTG CTTGCCATCG AGCAGGTGGC CCTGGTCTGC
CCCAAGAGCG CCGACATCGT GCAGGCCGGC AACTTCGGCC CCATACGCAC CTTCGTGGAG
TACGCGGACG CCGCGCAGAA GGCGCGCTTC CTGCCGGATC TGCTGGCTGG AAAAAAGCTC
ATTTCTCTGG GCATGACCGA GCCCGATGCA GGCTCGGCCG TGACCGAGCT GAGGACCACG
GCCACGCTGG AGGGCGATCA CTATGTGATC AACGGCAGCA AGGTGTTCTC CACGCACAGC
CCCGAAGCCG ACCTGTTCCT GGTCTACGTG CGCTTCGGGC CGGGCGTGGA CGGCATAGGC
TCGGTGCTGG TGGAGCGCGG CACGCCCGGC GTCGAGGTCG GCCAGCCTTC GGCCTTCATG
AATGGCGAGC AATGGGCGCA GCTGTATTTC GAGAACTGCC GCATTCCGCG CGAGAACGTG
CTGCTGGGCG CGGGTGGATT CAAGAAGCAG ATCTCGGGCT TCAACGTGGA GCGCCTGGGC
AATGCCTCGC GCGCGCTGGC GCTGGGCCGG CATGCCTTCA ACCTGGCGCG CGAGCACGCA
CGGGTACGCC GCCAGTTCGG ACGCGAGCTG TGCGAGTTCC AGGGCCTGCA GTGGAAGTTC
GCCGACATGT GGATGAAGCT GGAGCAGGCC CAGCTGCTGC TCTACAAGGC CGCGCTCGAG
GGTGAGCATG GCCTGCCCAG CGCGCAAAGC ACGGCCATGG CCAAGCTGGC CTGCAATCTG
GCGGGCTGGG AGGTGTCCAA CGAGGCCATG CAGGTCATGG GGGGCCTGGG CTTCAGCCAG
GAGGCCCTGG TGGAGTACTG CGTGCGCCGC ACGCGCGGCT GGATGATCGC CGGCGGCTCC
ATCGAAGTGC TCAGGAACCG CATCGCCGAG GGCGTCTTCG GGCGGACCTT CTCCCAGAAA
GCCTCCCAGC CCGCACCCCG GCAGTAA
 
Protein sequence
MDFTLSEEHQ AFADSVARFA QDKLAAGALE RAHSPHYPWE TASLLAEQGL LGIAFPEADG 
GQGGSLMHAV LAIEQVALVC PKSADIVQAG NFGPIRTFVE YADAAQKARF LPDLLAGKKL
ISLGMTEPDA GSAVTELRTT ATLEGDHYVI NGSKVFSTHS PEADLFLVYV RFGPGVDGIG
SVLVERGTPG VEVGQPSAFM NGEQWAQLYF ENCRIPRENV LLGAGGFKKQ ISGFNVERLG
NASRALALGR HAFNLAREHA RVRRQFGREL CEFQGLQWKF ADMWMKLEQA QLLLYKAALE
GEHGLPSAQS TAMAKLACNL AGWEVSNEAM QVMGGLGFSQ EALVEYCVRR TRGWMIAGGS
IEVLRNRIAE GVFGRTFSQK ASQPAPRQ