| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5425 |
|---|
| Symbol | |
|---|
| ID | 4042286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 2172794 |
|---|
| End bp | 2173948 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637980843 |
|---|
| Product | putative butyryl-CoA dehydrogenase |
|---|
| Protein accession | YP_587553 |
|---|
| Protein GI | 94314344 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCA AACTCAGCGA GGAACATCAG GCTTTCGCGG ACTCGGTTGC CCGTTTTGCG
CAGGACAAAC TCAAGGATGG CGCGCTGGCC CGGGCACATT CGCCCCACTA CCCCTGGGAC
ACGGCGGCGC TGCTCGCCGA GCAGGGGCTG CTGGGCATCG CCTTCTCCGA AGAAGATGGC
GGCCAGGGCG GCACGCTGAT GCACGCGGTG CTGGCGATCG AGCAAATCGC GCTGGTTTGC
CCCAGGAGCG CCGACATCGT CCAGGCTGGC AACTTCGGGC CGATTCGGAC GTTCGTGGAA
TACGCATCGC CCGAGCAGAA AGCGCGATAC CTGCCGGACC TCCTGGCTGG CCGCAAGGTG
GTCTCGCTGG GCATGAGCGA ACCCGATGCC GGGTCCGCCG TGACCGAGTT GAAAACCAGC
GCGCGCCTCG ACGGTGACAG CTACGTCATC AACGGCAGCA AGGTTTTCTC CACGCACAGC
CCCGACGCCG AGCTTTTCCT GATCTATGTA CGCTTCGGCC CGGGCGTCGG TGGCATCGGC
TCCGTGCTGG TCGAGCGCGG CACGCCCGGC TTCCAGGTCG GCGAGCCATC ATCGTTCATG
AACGGCGAGC AGTGGTCGCA GCTCTACTTC GATGATTGCC GTATCCCGGT GGAAAACGTG
CTGCTCGGAC CGGGCGGTTT CAAGAAGCAG ATCTCGGGGT TCAACGTCGA GCGTCTGGGC
AACTCGTCAC GCGCGCTGGC GCTGGGGCGC CACGCGTTCA ACGTGGCCCG GGAACATGCC
ATGACCCGCA AGCAGTTCGG CCGCGAGCTC TGCGAATTCC AGGGCATTCA GTGGAAGTTC
GCGGATATGG CGATGAAGCT GGAGCAGGCG CAGATGATGC TGTATCGCGC CGCTCTCGAA
GGCGAGCACG GACTGCCCAG CGCGCAGAGC ACGGCTATGG CCAAGCTGGC CTGCAACATG
GCTGGCTGGG AGGTTTCCAA TGAAGCGCTG CAGGTGATGG GCGGCATGGG CTTCAGCCAG
GAATCTCTCG TGGAGTACTG CGTGCGGCGG ACGCGCGGCT GGATGATCGC CGGTGGCTCC
ATCGAAATCC TGAAGAACCG CGTCGCTGAA GGCGTCTTCG GCAGGACGTT CTCGCAGCGC
CCGACCAACG GCTGA
|
|---|
| Protein sequence | MDFKLSEEHQ AFADSVARFA QDKLKDGALA RAHSPHYPWD TAALLAEQGL LGIAFSEEDG
GQGGTLMHAV LAIEQIALVC PRSADIVQAG NFGPIRTFVE YASPEQKARY LPDLLAGRKV
VSLGMSEPDA GSAVTELKTS ARLDGDSYVI NGSKVFSTHS PDAELFLIYV RFGPGVGGIG
SVLVERGTPG FQVGEPSSFM NGEQWSQLYF DDCRIPVENV LLGPGGFKKQ ISGFNVERLG
NSSRALALGR HAFNVAREHA MTRKQFGREL CEFQGIQWKF ADMAMKLEQA QMMLYRAALE
GEHGLPSAQS TAMAKLACNM AGWEVSNEAL QVMGGMGFSQ ESLVEYCVRR TRGWMIAGGS
IEILKNRVAE GVFGRTFSQR PTNG
|
|---|
| |