Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0202 |
Symbol | |
ID | 7269116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 252482 |
End bp | 253630 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643565071 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002461586 |
Protein GI | 219847153 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.221874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTTTG AATTAACCCC CGAACAAGAG CTGATTCGCC AAACGGTACG TGAATTCGCC GAGAAGGAGA TTGCGCCAAA AGCGCGGTAT GTCGATGAGC ATAGCGCTTT TCCGAGTGAG ACCTTTGCCA AAATGGCACA GCTCGGTCTG ATGGGGCTAC CGTTTCCCGA AGAATATGGC GGCGCCGGTG CGGATAGTGT GAGCACGGCT ATTGCCATTG AGGAAGTAGC CCGCTGCTGT GGTAGTACCG CGTTGGCGTA TGCTGCCCAC CTCGGACTGG GGAGTGCGCC GATTGCGATG TTCGGGACGG AAGACCAGAA GCGTCGGTTT CTCGTTCCAG CTGCGAAAGG TGAATATCTG GCGGCGTTTG GTCTCACCGA ACCGCACGCC GGCTCGGATG CCGGTGCAAC GCGAACAACG GCTCGGCTGG TTGGTGATGA GTGGGTGATC AACGGCCAAA AGATGTGGAT TACGAACGCA CCAATTGCCG GCCATATCAT CGTTACCGCA GTAACCGACC CGGAATTGGG CAAGAAGGGT ATCTCAGCCT TCATTGTGCC GCGTGGTACT CCGGGGTTAA GCTTCGGGAA GCACGAGCCA AAAATGGGGC TGCGCGGTTC GGTGAGCACT GCGGTGATGC TTGATGATGT GCGTGTGCCA CGTGAAAACC TGCTCGGCGA ACGTGGCCGA GGGTTCATCC AGTTCCTACA AGTTCTCGAC GGTGGTCGGA TTGGGATCGG GGCCATGGCG ATTGGGTTAG CCCAAGCCGC CTATGAGGCT GCTGTTGCCT ATGCACGTGA GCGAACGGCG TTTGGCAAAC CGATTGGCGC TCATCAGTCG GTGGCGAATA TGATTGCCAA TATGGCGGTT GATCTCGCTG CTGCTCGTGC GCTGGTTTAT ACGGCAGCCC GGATGAAAGA TGCCGGTAAA CCGTACACAC GTGAGGCAGC TATCGCTAAA CTCTTCGCCT CAGAAGCCTC CGAGCGGATT TGTCGCGATG CCATCCAGGT CTTCGGTGGC TACGGGTACA GCCAAGAATA CCCGGTTGAG CGATTGTACC GTGATACCCG CCTGCTGACT ATTGGCGAAG GAACCTCAGA GATCTTGCGA GGAGTGATTG CACACTCCGT GCTTGGTCTG CGCGGGTAA
|
Protein sequence | MDFELTPEQE LIRQTVREFA EKEIAPKARY VDEHSAFPSE TFAKMAQLGL MGLPFPEEYG GAGADSVSTA IAIEEVARCC GSTALAYAAH LGLGSAPIAM FGTEDQKRRF LVPAAKGEYL AAFGLTEPHA GSDAGATRTT ARLVGDEWVI NGQKMWITNA PIAGHIIVTA VTDPELGKKG ISAFIVPRGT PGLSFGKHEP KMGLRGSVST AVMLDDVRVP RENLLGERGR GFIQFLQVLD GGRIGIGAMA IGLAQAAYEA AVAYARERTA FGKPIGAHQS VANMIANMAV DLAAARALVY TAARMKDAGK PYTREAAIAK LFASEASERI CRDAIQVFGG YGYSQEYPVE RLYRDTRLLT IGEGTSEILR GVIAHSVLGL RG
|
| |