Gene Cagg_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0202 
Symbol 
ID7269116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp252482 
End bp253630 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content57% 
IMG OID643565071 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002461586 
Protein GI219847153 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.221874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTG AATTAACCCC CGAACAAGAG CTGATTCGCC AAACGGTACG TGAATTCGCC 
GAGAAGGAGA TTGCGCCAAA AGCGCGGTAT GTCGATGAGC ATAGCGCTTT TCCGAGTGAG
ACCTTTGCCA AAATGGCACA GCTCGGTCTG ATGGGGCTAC CGTTTCCCGA AGAATATGGC
GGCGCCGGTG CGGATAGTGT GAGCACGGCT ATTGCCATTG AGGAAGTAGC CCGCTGCTGT
GGTAGTACCG CGTTGGCGTA TGCTGCCCAC CTCGGACTGG GGAGTGCGCC GATTGCGATG
TTCGGGACGG AAGACCAGAA GCGTCGGTTT CTCGTTCCAG CTGCGAAAGG TGAATATCTG
GCGGCGTTTG GTCTCACCGA ACCGCACGCC GGCTCGGATG CCGGTGCAAC GCGAACAACG
GCTCGGCTGG TTGGTGATGA GTGGGTGATC AACGGCCAAA AGATGTGGAT TACGAACGCA
CCAATTGCCG GCCATATCAT CGTTACCGCA GTAACCGACC CGGAATTGGG CAAGAAGGGT
ATCTCAGCCT TCATTGTGCC GCGTGGTACT CCGGGGTTAA GCTTCGGGAA GCACGAGCCA
AAAATGGGGC TGCGCGGTTC GGTGAGCACT GCGGTGATGC TTGATGATGT GCGTGTGCCA
CGTGAAAACC TGCTCGGCGA ACGTGGCCGA GGGTTCATCC AGTTCCTACA AGTTCTCGAC
GGTGGTCGGA TTGGGATCGG GGCCATGGCG ATTGGGTTAG CCCAAGCCGC CTATGAGGCT
GCTGTTGCCT ATGCACGTGA GCGAACGGCG TTTGGCAAAC CGATTGGCGC TCATCAGTCG
GTGGCGAATA TGATTGCCAA TATGGCGGTT GATCTCGCTG CTGCTCGTGC GCTGGTTTAT
ACGGCAGCCC GGATGAAAGA TGCCGGTAAA CCGTACACAC GTGAGGCAGC TATCGCTAAA
CTCTTCGCCT CAGAAGCCTC CGAGCGGATT TGTCGCGATG CCATCCAGGT CTTCGGTGGC
TACGGGTACA GCCAAGAATA CCCGGTTGAG CGATTGTACC GTGATACCCG CCTGCTGACT
ATTGGCGAAG GAACCTCAGA GATCTTGCGA GGAGTGATTG CACACTCCGT GCTTGGTCTG
CGCGGGTAA
 
Protein sequence
MDFELTPEQE LIRQTVREFA EKEIAPKARY VDEHSAFPSE TFAKMAQLGL MGLPFPEEYG 
GAGADSVSTA IAIEEVARCC GSTALAYAAH LGLGSAPIAM FGTEDQKRRF LVPAAKGEYL
AAFGLTEPHA GSDAGATRTT ARLVGDEWVI NGQKMWITNA PIAGHIIVTA VTDPELGKKG
ISAFIVPRGT PGLSFGKHEP KMGLRGSVST AVMLDDVRVP RENLLGERGR GFIQFLQVLD
GGRIGIGAMA IGLAQAAYEA AVAYARERTA FGKPIGAHQS VANMIANMAV DLAAARALVY
TAARMKDAGK PYTREAAIAK LFASEASERI CRDAIQVFGG YGYSQEYPVE RLYRDTRLLT
IGEGTSEILR GVIAHSVLGL RG