Gene Veis_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3620 
Symbol 
ID4690498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4005310 
End bp4006503 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content68% 
IMG OID639851375 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_998355 
Protein GI121610548 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC TCAGCCCCGA GCAACGCACC CTCCAACGCC ATGCCCGCGC GCTTGCGCAG 
GACGCGATGC TGCCGCGCGC TGCCGAGGTC GATCGCACCG AGGCTTACCC CTGGCACACG
GTTCAGGCGC TGCGCGGGCA TGGGTTCATG GGCATGACCA TGCCGGTCGA ATATGGCGGC
AAAGGCGCCA GCTACCTGGA TGCGGTGATT GCGATCGAGG AGTTCGCCAA GGTCTGCGCT
GCCTCCGGCC GGATCATGGT CGAGTCGAAC ATGGGTGCGA TCGGCGCGAT CATGAAGTAC
GGCAGCGACG CGCAAAAGCG CCTGGCCGCC GCGCTCGTGC TCGACGGCGA CAAACCCGCC
ATCTGCATCA CCGAGCCCGA AGCCGGCAGC GCCGCGACCG ACATGCGCAC CACGGCCACG
CGCCGCGGTG ACAGCTACAT CCTCGATGGC GCCAAGCACT GGATCACCGG CGCCGGCGTC
TCGCGCCTGC ATTTCGTCTT CGCGCGGGTC ATCGAGGACG GCGTCGACCG AGGGATTGGC
GGCTTCATCG TGGTGGGCCC CGATGTGCCC GGCATGAGCA TCCGGCGCCT TTTTGCGATG
GGCATTCGCG GGGTGCCGGA GGGCCATATC GGCTTCGACC GGGTCGAGGT GCCTGCCGCG
ATGAGGGTGT GCCCTCCGGG CGGCGTGGAA CGCGGTTTCG CGGGCCTGAT GAACGCCTAC
AACGCGCAGC GCGTGGGTGC CGCGACGGTG GGCCTCGGCA TTGCCCAGGG GGCCTTCGAA
CTCGCCGTCG CCTATGCCAA GGAACGCCAG CAGTTCGGCC GCCCGATTGG CGAATTCCAG
GGGGTGCAGT GGATGCTGGC CGACATGTCG GTGCAGTTGG AGGCAGCGCG CGCACTGATC
TACCGCGCAG CCACCAGCGG CGACGAGTTT CCCGACATGC AGGCGGCGGC GCAGGCCAAG
GTCTTTGCGG CCGATACCGC CATCGCGGTG ACCAACGATG CGCTGCAAAT CCACGGTTCG
GCCGGCTATG GCCGCGATCG CCCGCTGGAA CGCATGGTGC GCGATGCCCG CATGTTCACG
ATTTCTGGCG GCACCGCGCA GGTGCTGCGC ACGCAGGTGG CGAGCAGGAT TTTGGGCGAG
AAACTGCCGC AGACGCGCGA TGGCTATGTG CGCCAGCCCT TCGGGCAGCG CTGA
 
Protein sequence
MSNLSPEQRT LQRHARALAQ DAMLPRAAEV DRTEAYPWHT VQALRGHGFM GMTMPVEYGG 
KGASYLDAVI AIEEFAKVCA ASGRIMVESN MGAIGAIMKY GSDAQKRLAA ALVLDGDKPA
ICITEPEAGS AATDMRTTAT RRGDSYILDG AKHWITGAGV SRLHFVFARV IEDGVDRGIG
GFIVVGPDVP GMSIRRLFAM GIRGVPEGHI GFDRVEVPAA MRVCPPGGVE RGFAGLMNAY
NAQRVGAATV GLGIAQGAFE LAVAYAKERQ QFGRPIGEFQ GVQWMLADMS VQLEAARALI
YRAATSGDEF PDMQAAAQAK VFAADTAIAV TNDALQIHGS AGYGRDRPLE RMVRDARMFT
ISGGTAQVLR TQVASRILGE KLPQTRDGYV RQPFGQR