More than 300 homologs were found in PanDaTox collection
for query gene Pmen_2640 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_1809  Acyl-CoA dehydrogenase-like  84.82 
 
 
382 aa  680    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2640  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
382 aa  783    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3798  putative acyl-CoA dehydrogenase  90.84 
 
 
382 aa  726    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44590  putative acyl-CoA dehydrogenase  90.84 
 
 
382 aa  725    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.115887 
 
 
-
 
NC_008740  Maqu_3438  acyl-CoA dehydrogenase domain-containing protein  66.76 
 
 
379 aa  550  1e-155  Marinobacter aquaeolei VT8  Bacteria  normal  0.0342749  n/a   
 
 
-
 
NC_009943  Dole_0626  acyl-CoA dehydrogenase domain-containing protein  63.9 
 
 
386 aa  504  1e-141  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000265202  n/a   
 
 
-
 
NC_010682  Rpic_0104  acyl-CoA dehydrogenase domain protein  53.7 
 
 
384 aa  410  1e-113  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0111  acyl-CoA dehydrogenase domain protein  53.17 
 
 
384 aa  411  1e-113  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0668  putative acyl-CoA dehydrogenase  53.72 
 
 
379 aa  405  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.11454 
 
 
-
 
NC_011004  Rpal_2429  acyl-CoA dehydrogenase domain protein  53.72 
 
 
382 aa  405  1.0000000000000001e-112  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.62219  n/a   
 
 
-
 
NC_007778  RPB_3267  Acyl-CoA dehydrogenase-like  53.19 
 
 
379 aa  401  9.999999999999999e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.691288  normal  0.607013 
 
 
-
 
NC_007958  RPD_2198  acyl-CoA dehydrogenase-like  52.93 
 
 
379 aa  398  9.999999999999999e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.583783 
 
 
-
 
NC_007348  Reut_B5206  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  52.39 
 
 
387 aa  385  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  0.652072  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1147  acyl-CoA dehydrogenase  50.92 
 
 
390 aa  384  1e-105  Burkholderia pseudomallei 1710b  Bacteria  normal  0.799274  n/a   
 
 
-
 
NC_009075  BURPS668_A2926  acyl-CoA dehydrogenase  50.92 
 
 
390 aa  384  1e-105  Burkholderia pseudomallei 668  Bacteria  normal  0.532316  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2771  acyl-CoA dehydrogenase  50.92 
 
 
390 aa  384  1e-105  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2210  acyl-CoA dehydrogenase domain-containing protein  50.91 
 
 
382 aa  382  1e-105  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.766307 
 
 
-
 
NC_007650  BTH_II0292  acyl-CoA dehydrogenase  51.18 
 
 
390 aa  379  1e-104  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3181  acyl-CoA dehydrogenase-like protein  51.05 
 
 
399 aa  380  1e-104  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3193  acyl-CoA dehydrogenase domain-containing protein  51.05 
 
 
399 aa  379  1e-104  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3243  acyl-CoA dehydrogenase domain-containing protein  51.05 
 
 
399 aa  380  1e-104  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4326  acyl-CoA dehydrogenase domain-containing protein  52.38 
 
 
388 aa  371  1e-102  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0122368 
 
 
-
 
NC_009953  Sare_4766  acyl-CoA dehydrogenase domain-containing protein  51.3 
 
 
394 aa  373  1e-102  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000278675 
 
 
-
 
NC_013159  Svir_16500  acyl-CoA dehydrogenase  51.17 
 
 
384 aa  374  1e-102  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4612  acyl-CoA dehydrogenase domain-containing protein  49.61 
 
 
392 aa  362  7.0000000000000005e-99  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4432  acyl-CoA dehydrogenase domain protein  49.6 
 
 
387 aa  362  8e-99  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0429863 
 
 
-
 
NC_008048  Sala_2313  acyl-CoA dehydrogenase-like protein  49.34 
 
 
391 aa  348  1e-94  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1179  acyl-CoA dehydrogenase domain-containing protein  48.01 
 
 
381 aa  343  4e-93  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.532385 
 
 
-
 
NC_013441  Gbro_3830  acyl-CoA dehydrogenase domain protein  48.52 
 
 
386 aa  339  5e-92  Gordonia bronchialis DSM 43247  Bacteria  normal  0.494815  n/a   
 
 
-
 
NC_007760  Adeh_1132  Acyl-CoA dehydrogenase, type 1  47.15 
 
 
385 aa  339  5e-92  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4554  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
386 aa  337  1.9999999999999998e-91  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007950  Bpro_5265  acyl-CoA dehydrogenase-like  46.15 
 
 
381 aa  336  3.9999999999999995e-91  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_1261  acyl-CoA dehydrogenase domain protein  46.37 
 
 
385 aa  336  5e-91  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.403217  n/a   
 
 
-
 
NC_011145  AnaeK_1192  acyl-CoA dehydrogenase domain protein  46.37 
 
 
385 aa  335  7e-91  Anaeromyxobacter sp. K  Bacteria  normal  0.0644386  n/a   
 
 
-
 
NC_008726  Mvan_4847  acyl-CoA dehydrogenase domain-containing protein  49.87 
 
 
386 aa  333  3e-90  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.258708 
 
 
-
 
NC_009565  TBFG_10993  acyl-CoA dehydrogenase fadE13  50.67 
 
 
382 aa  327  2.0000000000000001e-88  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000447194  normal  0.375388 
 
 
-
 
NC_007951  Bxe_A2768  putative acyl-CoA dehydrogenase, long- chain specific  43.77 
 
 
391 aa  324  2e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.466839 
 
 
-
 
NC_014158  Tpau_2827  acyl-CoA dehydrogenase domain protein  46.3 
 
 
391 aa  323  3e-87  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226434  n/a   
 
 
-
 
NC_007908  Rfer_3506  acyl-CoA dehydrogenase-like  45.01 
 
 
388 aa  323  4e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.906324  n/a   
 
 
-
 
NC_008146  Mmcs_4305  acyl-CoA dehydrogenase-like protein  49.73 
 
 
382 aa  322  8e-87  Mycobacterium sp. MCS  Bacteria  normal  0.355626  n/a   
 
 
-
 
NC_008705  Mkms_4391  acyl-CoA dehydrogenase domain-containing protein  49.73 
 
 
382 aa  322  8e-87  Mycobacterium sp. KMS  Bacteria  normal  0.224235  normal 
 
 
-
 
NC_009077  Mjls_4685  acyl-CoA dehydrogenase domain-containing protein  49.73 
 
 
382 aa  321  9.999999999999999e-87  Mycobacterium sp. JLS  Bacteria  normal  normal  0.561933 
 
 
-
 
NC_014230  CA2559_00085  probable acyl-CoA dehydrogenase  43.09 
 
 
386 aa  317  3e-85  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1884  acyl-CoA dehydrogenase domain-containing protein  49.05 
 
 
382 aa  316  4e-85  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0914316 
 
 
-
 
NC_013739  Cwoe_1590  acyl-CoA dehydrogenase domain protein  43.39 
 
 
396 aa  306  3e-82  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.663907 
 
 
-
 
NC_013411  GYMC61_2106  acyl-CoA dehydrogenase domain protein  42.22 
 
 
381 aa  303  4.0000000000000003e-81  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_4761  acyl-CoA dehydrogenase domain-containing protein  43.8 
 
 
386 aa  303  4.0000000000000003e-81  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3613  acyl-CoA dehydrogenase domain-containing protein  42.3 
 
 
382 aa  300  3e-80  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4164  acyl-CoA dehydrogenase domain protein  42.55 
 
 
380 aa  300  3e-80  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1226  acyl-CoA dehydrogenase domain protein  40.79 
 
 
381 aa  299  5e-80  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5007  acyl-CoA dehydrogenase  42.59 
 
 
378 aa  296  6e-79  Pseudomonas aeruginosa PA7  Bacteria  normal  0.284133  n/a   
 
 
-
 
NC_013510  Tcur_1158  acyl-CoA dehydrogenase domain protein  42.22 
 
 
380 aa  295  9e-79  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4696  Acyl-CoA dehydrogenase-like  42.59 
 
 
378 aa  291  1e-77  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0700778  normal  0.0611001 
 
 
-
 
NC_009367  OSTLU_41633  predicted protein  41.98 
 
 
429 aa  290  2e-77  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.0953919 
 
 
-
 
NC_013441  Gbro_0451  acyl-CoA dehydrogenase domain protein  42.41 
 
 
382 aa  290  2e-77  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009375  OSTLU_36653  predicted protein  41.98 
 
 
429 aa  290  2e-77  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.022493  hitchhiker  0.00305491 
 
 
-
 
NC_014165  Tbis_0526  acyl-CoA dehydrogenase domain-containing protein  40.53 
 
 
381 aa  290  2e-77  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0149792 
 
 
-
 
NC_009077  Mjls_4090  acyl-CoA dehydrogenase domain-containing protein  43.01 
 
 
380 aa  290  3e-77  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2850  acyl-CoA dehydrogenase domain-containing protein  41.42 
 
 
381 aa  290  3e-77  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1015  acyl-CoA dehydrogenase domain-containing protein  40.32 
 
 
381 aa  290  4e-77  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.629454 
 
 
-
 
NC_008726  Mvan_4587  acyl-CoA dehydrogenase domain-containing protein  41.16 
 
 
380 aa  287  2e-76  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3923  acyl-CoA dehydrogenase domain protein  41.32 
 
 
381 aa  286  4e-76  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0898  acyl-CoA dehydrogenase domain-containing protein  42.06 
 
 
379 aa  286  4e-76  Pseudomonas mendocina ymp  Bacteria  normal  0.592416  normal 
 
 
-
 
NC_013440  Hoch_5486  acyl-CoA dehydrogenase domain protein  42.59 
 
 
381 aa  285  1.0000000000000001e-75  Haliangium ochraceum DSM 14365  Bacteria  normal  0.361587  normal  0.275815 
 
 
-
 
NC_007948  Bpro_3014  acyl-CoA dehydrogenase-like  41.51 
 
 
389 aa  285  1.0000000000000001e-75  Polaromonas sp. JS666  Bacteria  normal  0.51583  normal  0.368309 
 
 
-
 
NC_010678  Rpic_4927  acyl-CoA dehydrogenase domain protein  42.22 
 
 
380 aa  284  2.0000000000000002e-75  Ralstonia pickettii 12J  Bacteria  normal  normal  0.905693 
 
 
-
 
NC_009565  TBFG_12737  acyl-CoA dehydrogenase fadE20  41.95 
 
 
386 aa  284  2.0000000000000002e-75  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.416268 
 
 
-
 
NC_012857  Rpic12D_3850  acyl-CoA dehydrogenase domain protein  42.22 
 
 
380 aa  284  2.0000000000000002e-75  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4102  acyl-CoA dehydrogenase domain-containing protein  42.19 
 
 
388 aa  283  3.0000000000000004e-75  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.757866  normal  0.974192 
 
 
-
 
NC_009338  Mflv_2118  acyl-CoA dehydrogenase domain-containing protein  40.63 
 
 
380 aa  283  5.000000000000001e-75  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.438957 
 
 
-
 
NC_009077  Mjls_4308  acyl-CoA dehydrogenase domain-containing protein  39.84 
 
 
380 aa  282  6.000000000000001e-75  Mycobacterium sp. JLS  Bacteria  normal  0.828452  normal 
 
 
-
 
NC_008146  Mmcs_4078  acyl-CoA dehydrogenase-like protein  39.84 
 
 
380 aa  282  6.000000000000001e-75  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4154  acyl-CoA dehydrogenase domain-containing protein  39.84 
 
 
380 aa  282  6.000000000000001e-75  Mycobacterium sp. KMS  Bacteria  normal  normal  0.815208 
 
 
-
 
NC_007333  Tfu_1512  putative acyl-CoA dehydrogenase  41.05 
 
 
382 aa  282  7.000000000000001e-75  Thermobifida fusca YX  Bacteria  normal  0.116644  n/a   
 
 
-
 
NC_009767  Rcas_2461  acyl-CoA dehydrogenase domain-containing protein  41.42 
 
 
381 aa  281  9e-75  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.160964  normal 
 
 
-
 
NC_009074  BURPS668_0071  acyl-CoA dehydrogenase  42.86 
 
 
378 aa  279  5e-74  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
BN001307  ANIA_01699  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_4G08490)  39.61 
 
 
564 aa  279  6e-74  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.0281763 
 
 
-
 
NC_013947  Snas_3899  acyl-CoA dehydrogenase domain-containing protein  40.43 
 
 
380 aa  279  6e-74  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.601021  normal 
 
 
-
 
NC_007434  BURPS1710b_0285  putative acyl-CoA dehydrogenase  42.86 
 
 
430 aa  278  8e-74  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2439  long-chain-acyl-CoA dehydrogenase  41.19 
 
 
391 aa  278  1e-73  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0991983  normal  0.0569635 
 
 
-
 
NC_010002  Daci_0697  acyl-CoA dehydrogenase domain-containing protein  42.18 
 
 
380 aa  278  2e-73  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A3482  long-chain specific acyl-CoA dehydrogenase  42.59 
 
 
378 aa  277  3e-73  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2728  long-chain specific acyl-CoA dehydrogenase  42.59 
 
 
378 aa  277  3e-73  Burkholderia mallei NCTC 10247  Bacteria  normal  0.890874  n/a   
 
 
-
 
NC_008836  BMA10229_A1825  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  42.59 
 
 
378 aa  277  3e-73  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1553  acyl-CoA dehydrogenase domain-containing protein  38.26 
 
 
381 aa  276  4e-73  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0069  acyl-CoA dehydrogenase  42.71 
 
 
378 aa  276  4e-73  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0313  acyl-CoA dehydrogenase domain protein  40.96 
 
 
381 aa  275  7e-73  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0271  acyl-CoA dehydrogenase domain-containing protein  40.53 
 
 
381 aa  275  8e-73  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  41.6 
 
 
379 aa  275  1.0000000000000001e-72  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0288  acyl-CoA dehydrogenase  39.79 
 
 
383 aa  274  2.0000000000000002e-72  Burkholderia thailandensis E264  Bacteria  normal  0.553165  n/a   
 
 
-
 
NC_009511  Swit_1764  acyl-CoA dehydrogenase domain-containing protein  41.18 
 
 
380 aa  273  4.0000000000000004e-72  Sphingomonas wittichii RW1  Bacteria  normal  0.937718  normal 
 
 
-
 
NC_009439  Pmen_2971  acyl-CoA dehydrogenase domain-containing protein  40.48 
 
 
379 aa  273  4.0000000000000004e-72  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.134618 
 
 
-
 
NC_009078  BURPS1106A_A2775  acyl-CoA dehydrogenase  39.79 
 
 
383 aa  273  4.0000000000000004e-72  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2930  acyl-CoA dehydrogenase  39.79 
 
 
383 aa  273  4.0000000000000004e-72  Burkholderia pseudomallei 668  Bacteria  normal  0.168413  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1150  acyl-CoA dehydrogenase  39.52 
 
 
383 aa  273  5.000000000000001e-72  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4452  acyl-CoA dehydrogenase domain protein  40.9 
 
 
384 aa  272  6e-72  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0906  acyl-CoA dehydrogenase domain-containing protein  40.79 
 
 
380 aa  272  8.000000000000001e-72  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0060  acyl-CoA dehydrogenase  41.53 
 
 
378 aa  270  2e-71  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2752  acyl-CoA dehydrogenase-like  39.95 
 
 
387 aa  270  2.9999999999999997e-71  Rhodoferax ferrireducens T118  Bacteria  normal  0.171242  n/a   
 
 
-
 
NC_008463  PA14_49080  putative acyl-CoA dehydrogenase  40.27 
 
 
379 aa  270  4e-71  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000217438 
 
 
-
 
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