Gene Dole_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1553 
Symbol 
ID5694390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1851747 
End bp1852892 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID641264148 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001529434 
Protein GI158521564 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAC TGCATTATAC GGAAGCCCAT GAAGCGTTCC GCAAGCGGCT CCGCGCATTC 
TGTGAAAAAG AGATCACCCC CCATGTCGAG GAGTGGGAGG CAAGCCATAT CGTGCCCAAA
AGCGCCTGGA AGGCCATGGG TGCCGGAGGG TTTTTGTGTA CCAACGCGCC GGCTGAATAC
GGTGGCCACG GCCTGGATTT TCTCTATTCG GTGATCGTGG CCGAAGAGCT GGCCCGGACC
AACCACACCG GGCTGGCCGC GCCCCTGCAC AGCGACATCG TGGTGCCCTA CATCGTTTCC
TACGGCTCGG AGGAGATCAA GAAAAAATAC ATTCCCGGGT GCACGTCCGG CGACATCATC
ACGGCTGTGG CCATGACCGA ACCGGATGCC GGCAGTGACG TTGCCGCCAT GACCACCATC
GCGGTGGAAG AGGGCGACGA GGTAGTGCTC AACGGGTCCA AGACCTTTAT CACCAACGGC
ATCAACGCCG ACCTGGTGGT GGTGGCGGCA AAGGACCCGG CCGCGGAAAA CCCCCACCAG
GCGGTTTCCC TTTACATTGT GGAAGACGGC ACCCCCGGTT TTACCCGGGG CCGGCACCTG
GAGAAGATGG GCTTCCACAG CCAGGACACG GCCGAGCTGT TTTTCACCAA CTGCCGCATC
CCCAGGAAAA ACCTGCTGGG CGAAAAGAAC ATGGGGTTTG TCATGCTCAT GGAAAAGCTT
CAGCAGGAGC GGCTGATCTG CGCGGTCATG GCCCAGTTTG CCGTGGAGAT CATGATGGAG
GCCGTGGTGG GGTACTGCAA GGGCACCAAG GACACCACGG GCAAGCCCTA CTCAAAACAC
CAGGCCGTCA ACTTCCAGCT GGTGGAGATG ATGACCGAGG CCCATATCGG ACGGGTGTTT
ATGGAAAAGC TGGTGGCCGA CCACATGGAA GGAAAGAACG TGGTTCGGGA GACCTGCATG
GCCAAGTACT GGCACACCGA CCTGACCCAG ACGATCTCCA ACCAGGTGCT GGACCTGATC
GGCGAGGAGG CCACGGCCGA ACGGAGCCTG ATTCTGAGGG GCTGGCGGGA CCTGCGGGTG
CTGCCGATTT TTGCCGGCAC CAACGAGATC ATGAAGCTGG TGGTGGGGAA GATGTCGGGC
CTGTAA
 
Protein sequence
MDILHYTEAH EAFRKRLRAF CEKEITPHVE EWEASHIVPK SAWKAMGAGG FLCTNAPAEY 
GGHGLDFLYS VIVAEELART NHTGLAAPLH SDIVVPYIVS YGSEEIKKKY IPGCTSGDII
TAVAMTEPDA GSDVAAMTTI AVEEGDEVVL NGSKTFITNG INADLVVVAA KDPAAENPHQ
AVSLYIVEDG TPGFTRGRHL EKMGFHSQDT AELFFTNCRI PRKNLLGEKN MGFVMLMEKL
QQERLICAVM AQFAVEIMME AVVGYCKGTK DTTGKPYSKH QAVNFQLVEM MTEAHIGRVF
MEKLVADHME GKNVVRETCM AKYWHTDLTQ TISNQVLDLI GEEATAERSL ILRGWRDLRV
LPIFAGTNEI MKLVVGKMSG L