Gene Svir_16500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16500 
Symbol 
ID8386982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1700681 
End bp1701835 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content68% 
IMG OID644975726 
Productacyl-CoA dehydrogenase 
Protein accessionYP_003133510 
Protein GI257055678 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGGA ACGATCCCTT CGCCACGCCC GAGCGGCGCA CGTTGCGCCA GACCGTGCGC 
CGGTTCGTGA CCGCCGAGAT CCTGCCGCAC CTGGACGAAT GGGAACGCGC CGGGGAACTG
CCGCGCGAGT TGCACGCCAA AGCCGCCGAA CTGGGACTGC TGGGGGTGTC GTTCCCCGAG
TCCGTGGGCG GTTCGGGCGG TGACATCGTG GACGCCCTCA CGGTCGTCGA GGAGGTCCAC
CTCGCCGGTG GTTCGGGTGG AGTGGTCGCG TCGCTGTTCA CCGGTGGCAT CGCCCTGCCG
CACATCGTGG CCGCGGGGGA TCGGTGGCAG ATCGACCGGT GGGTGCGACC CACCCTGGCG
GGCAAGACCA TCGGGGCGTT GGCGATCACC GAACCCGACG GGGGGTCGGA CGTGGCGTCG
TTGCGGACCA CGGCGGTGCG CGACGGCGAC CACTACGTCG TCAACGGGGC GAAGACGTTC
ATCACCTCCG GTTGCCGCGC CGACTTCGTC ACCACCGCCG TGCGGACGGG ACAGCCCGGG
GCGCACGGGC TTTCCCTGCT GGTGATCGAG AAGGGTACGC CCGGCTTCTT TGTGAGCCGC
AGGTTGGAGA AGATGGGCTG GCACTGTTCC GACACCGCCG AATTGTCGTT CGACGACGTG
CGGGTTCCCG CCTCGCATCT GGTGGGGGCC GAGAACAGCG CTTTCGGCCA GATCGCCACA
CAGTTCGTCG CCGAGCGGCT CACATTGGCC GTGCAGGCGT ACGCCACCGC GCAACGCGCG
CTGGAGCGCA CGGTGGAGTG GTGCCGGCTG CGGGAGACGT TCGGCAGGCC GTTGATCTCG
CGGCAGACCG TGCAGCACAC GCTCGCCGAG ATGGCCCGGC GTATCGACGT CGCCCGCACC
TATGTCCGCC AGGTGGCGGC ACGCCATGCC GCGGGTGAGG AAGTGATCGC CCAGACGTGC
TTCGCCAAGA ACACCGCCGT CGAAGCGGGG TCATGGGTCG TCGACAAGGC CGTTCAACTC
CACGGGGGAC TCGGGTATTC ACGTGAGTCC GAAGTGGAGC GTCATTATCG GGACATGCGC
ATCCTCGGTA TCGGCGGTGG CGCCACTGAG ATCATGACGA CGTTGGCGGC CAAGCGGCTC
GGGTTCACCT CATGA
 
Protein sequence
MTGNDPFATP ERRTLRQTVR RFVTAEILPH LDEWERAGEL PRELHAKAAE LGLLGVSFPE 
SVGGSGGDIV DALTVVEEVH LAGGSGGVVA SLFTGGIALP HIVAAGDRWQ IDRWVRPTLA
GKTIGALAIT EPDGGSDVAS LRTTAVRDGD HYVVNGAKTF ITSGCRADFV TTAVRTGQPG
AHGLSLLVIE KGTPGFFVSR RLEKMGWHCS DTAELSFDDV RVPASHLVGA ENSAFGQIAT
QFVAERLTLA VQAYATAQRA LERTVEWCRL RETFGRPLIS RQTVQHTLAE MARRIDVART
YVRQVAARHA AGEEVIAQTC FAKNTAVEAG SWVVDKAVQL HGGLGYSRES EVERHYRDMR
ILGIGGGATE IMTTLAAKRL GFTS