Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16500 |
Symbol | |
ID | 8386982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1700681 |
End bp | 1701835 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975726 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_003133510 |
Protein GI | 257055678 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGGGA ACGATCCCTT CGCCACGCCC GAGCGGCGCA CGTTGCGCCA GACCGTGCGC CGGTTCGTGA CCGCCGAGAT CCTGCCGCAC CTGGACGAAT GGGAACGCGC CGGGGAACTG CCGCGCGAGT TGCACGCCAA AGCCGCCGAA CTGGGACTGC TGGGGGTGTC GTTCCCCGAG TCCGTGGGCG GTTCGGGCGG TGACATCGTG GACGCCCTCA CGGTCGTCGA GGAGGTCCAC CTCGCCGGTG GTTCGGGTGG AGTGGTCGCG TCGCTGTTCA CCGGTGGCAT CGCCCTGCCG CACATCGTGG CCGCGGGGGA TCGGTGGCAG ATCGACCGGT GGGTGCGACC CACCCTGGCG GGCAAGACCA TCGGGGCGTT GGCGATCACC GAACCCGACG GGGGGTCGGA CGTGGCGTCG TTGCGGACCA CGGCGGTGCG CGACGGCGAC CACTACGTCG TCAACGGGGC GAAGACGTTC ATCACCTCCG GTTGCCGCGC CGACTTCGTC ACCACCGCCG TGCGGACGGG ACAGCCCGGG GCGCACGGGC TTTCCCTGCT GGTGATCGAG AAGGGTACGC CCGGCTTCTT TGTGAGCCGC AGGTTGGAGA AGATGGGCTG GCACTGTTCC GACACCGCCG AATTGTCGTT CGACGACGTG CGGGTTCCCG CCTCGCATCT GGTGGGGGCC GAGAACAGCG CTTTCGGCCA GATCGCCACA CAGTTCGTCG CCGAGCGGCT CACATTGGCC GTGCAGGCGT ACGCCACCGC GCAACGCGCG CTGGAGCGCA CGGTGGAGTG GTGCCGGCTG CGGGAGACGT TCGGCAGGCC GTTGATCTCG CGGCAGACCG TGCAGCACAC GCTCGCCGAG ATGGCCCGGC GTATCGACGT CGCCCGCACC TATGTCCGCC AGGTGGCGGC ACGCCATGCC GCGGGTGAGG AAGTGATCGC CCAGACGTGC TTCGCCAAGA ACACCGCCGT CGAAGCGGGG TCATGGGTCG TCGACAAGGC CGTTCAACTC CACGGGGGAC TCGGGTATTC ACGTGAGTCC GAAGTGGAGC GTCATTATCG GGACATGCGC ATCCTCGGTA TCGGCGGTGG CGCCACTGAG ATCATGACGA CGTTGGCGGC CAAGCGGCTC GGGTTCACCT CATGA
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Protein sequence | MTGNDPFATP ERRTLRQTVR RFVTAEILPH LDEWERAGEL PRELHAKAAE LGLLGVSFPE SVGGSGGDIV DALTVVEEVH LAGGSGGVVA SLFTGGIALP HIVAAGDRWQ IDRWVRPTLA GKTIGALAIT EPDGGSDVAS LRTTAVRDGD HYVVNGAKTF ITSGCRADFV TTAVRTGQPG AHGLSLLVIE KGTPGFFVSR RLEKMGWHCS DTAELSFDDV RVPASHLVGA ENSAFGQIAT QFVAERLTLA VQAYATAQRA LERTVEWCRL RETFGRPLIS RQTVQHTLAE MARRIDVART YVRQVAARHA AGEEVIAQTC FAKNTAVEAG SWVVDKAVQL HGGLGYSRES EVERHYRDMR ILGIGGGATE IMTTLAAKRL GFTS
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