More than 300 homologs were found in PanDaTox collection
for query gene Rpic12D_0111 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_0111  acyl-CoA dehydrogenase domain protein  100 
 
 
384 aa  785    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0104  acyl-CoA dehydrogenase domain protein  94.53 
 
 
384 aa  743    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2429  acyl-CoA dehydrogenase domain protein  65.96 
 
 
382 aa  517  1.0000000000000001e-145  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.62219  n/a   
 
 
-
 
NC_007348  Reut_B5206  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  66.4 
 
 
387 aa  509  1e-143  Ralstonia eutropha JMP134  Bacteria  normal  0.652072  n/a   
 
 
-
 
NC_007778  RPB_3267  Acyl-CoA dehydrogenase-like  64.27 
 
 
379 aa  501  1e-141  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.691288  normal  0.607013 
 
 
-
 
NC_007958  RPD_2198  acyl-CoA dehydrogenase-like  65.05 
 
 
379 aa  502  1e-141  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.583783 
 
 
-
 
NC_009485  BBta_0668  putative acyl-CoA dehydrogenase  62.43 
 
 
379 aa  499  1e-140  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.11454 
 
 
-
 
NC_008786  Veis_2210  acyl-CoA dehydrogenase domain-containing protein  63.98 
 
 
382 aa  486  1e-136  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.766307 
 
 
-
 
NC_007435  BURPS1710b_A1147  acyl-CoA dehydrogenase  62.96 
 
 
390 aa  473  1e-132  Burkholderia pseudomallei 1710b  Bacteria  normal  0.799274  n/a   
 
 
-
 
NC_009075  BURPS668_A2926  acyl-CoA dehydrogenase  62.96 
 
 
390 aa  473  1e-132  Burkholderia pseudomallei 668  Bacteria  normal  0.532316  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2771  acyl-CoA dehydrogenase  62.96 
 
 
390 aa  473  1e-132  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0292  acyl-CoA dehydrogenase  62.96 
 
 
390 aa  471  1.0000000000000001e-131  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3506  acyl-CoA dehydrogenase-like  56.4 
 
 
388 aa  425  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  0.906324  n/a   
 
 
-
 
NC_009656  PSPA7_3798  putative acyl-CoA dehydrogenase  55.35 
 
 
382 aa  415  9.999999999999999e-116  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2640  acyl-CoA dehydrogenase domain-containing protein  53.17 
 
 
382 aa  411  1e-113  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_44590  putative acyl-CoA dehydrogenase  55.35 
 
 
382 aa  410  1e-113  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.115887 
 
 
-
 
NC_007492  Pfl01_1809  Acyl-CoA dehydrogenase-like  53.99 
 
 
382 aa  406  1.0000000000000001e-112  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3438  acyl-CoA dehydrogenase domain-containing protein  51.33 
 
 
379 aa  398  9.999999999999999e-111  Marinobacter aquaeolei VT8  Bacteria  normal  0.0342749  n/a   
 
 
-
 
NC_008048  Sala_2313  acyl-CoA dehydrogenase-like protein  54.52 
 
 
391 aa  384  1e-105  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0626  acyl-CoA dehydrogenase domain-containing protein  49.19 
 
 
386 aa  370  1e-101  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000265202  n/a   
 
 
-
 
NC_013159  Svir_16500  acyl-CoA dehydrogenase  50.13 
 
 
384 aa  358  9.999999999999999e-98  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4432  acyl-CoA dehydrogenase domain protein  50.13 
 
 
387 aa  353  2.9999999999999997e-96  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0429863 
 
 
-
 
NC_013441  Gbro_3830  acyl-CoA dehydrogenase domain protein  48.05 
 
 
386 aa  349  6e-95  Gordonia bronchialis DSM 43247  Bacteria  normal  0.494815  n/a   
 
 
-
 
NC_008726  Mvan_4847  acyl-CoA dehydrogenase domain-containing protein  49.74 
 
 
386 aa  338  9.999999999999999e-92  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.258708 
 
 
-
 
NC_009338  Mflv_4612  acyl-CoA dehydrogenase domain-containing protein  47.44 
 
 
392 aa  336  3.9999999999999995e-91  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4766  acyl-CoA dehydrogenase domain-containing protein  46.89 
 
 
394 aa  335  5.999999999999999e-91  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000278675 
 
 
-
 
NC_009380  Strop_4326  acyl-CoA dehydrogenase domain-containing protein  46.84 
 
 
388 aa  333  3e-90  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0122368 
 
 
-
 
NC_008699  Noca_4554  acyl-CoA dehydrogenase domain-containing protein  48.91 
 
 
386 aa  330  3e-89  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3181  acyl-CoA dehydrogenase-like protein  45.16 
 
 
399 aa  327  2.0000000000000001e-88  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3243  acyl-CoA dehydrogenase domain-containing protein  45.16 
 
 
399 aa  327  2.0000000000000001e-88  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10993  acyl-CoA dehydrogenase fadE13  49.33 
 
 
382 aa  326  3e-88  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000447194  normal  0.375388 
 
 
-
 
NC_009077  Mjls_3193  acyl-CoA dehydrogenase domain-containing protein  45.16 
 
 
399 aa  326  5e-88  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2827  acyl-CoA dehydrogenase domain protein  46.46 
 
 
391 aa  325  1e-87  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226434  n/a   
 
 
-
 
NC_008705  Mkms_4391  acyl-CoA dehydrogenase domain-containing protein  47.99 
 
 
382 aa  314  9.999999999999999e-85  Mycobacterium sp. KMS  Bacteria  normal  0.224235  normal 
 
 
-
 
NC_008146  Mmcs_4305  acyl-CoA dehydrogenase-like protein  47.99 
 
 
382 aa  314  9.999999999999999e-85  Mycobacterium sp. MCS  Bacteria  normal  0.355626  n/a   
 
 
-
 
NC_009077  Mjls_4685  acyl-CoA dehydrogenase domain-containing protein  47.99 
 
 
382 aa  313  2.9999999999999996e-84  Mycobacterium sp. JLS  Bacteria  normal  normal  0.561933 
 
 
-
 
NC_009338  Mflv_1884  acyl-CoA dehydrogenase domain-containing protein  47.18 
 
 
382 aa  308  8e-83  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0914316 
 
 
-
 
BN001307  ANIA_01699  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_4G08490)  40.29 
 
 
564 aa  305  7e-82  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.0281763 
 
 
-
 
NC_009675  Anae109_1179  acyl-CoA dehydrogenase domain-containing protein  44.39 
 
 
381 aa  295  1e-78  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.532385 
 
 
-
 
NC_009367  OSTLU_41633  predicted protein  42.13 
 
 
429 aa  292  7e-78  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.0953919 
 
 
-
 
NC_009375  OSTLU_36653  predicted protein  42.13 
 
 
429 aa  292  7e-78  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.022493  hitchhiker  0.00305491 
 
 
-
 
NC_013739  Cwoe_1590  acyl-CoA dehydrogenase domain protein  40.85 
 
 
396 aa  287  2e-76  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.663907 
 
 
-
 
NC_007950  Bpro_5265  acyl-CoA dehydrogenase-like  41.07 
 
 
381 aa  285  7e-76  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_1261  acyl-CoA dehydrogenase domain protein  42.29 
 
 
385 aa  276  6e-73  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.403217  n/a   
 
 
-
 
NC_007951  Bxe_A2768  putative acyl-CoA dehydrogenase, long- chain specific  39.84 
 
 
391 aa  275  1.0000000000000001e-72  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.466839 
 
 
-
 
NC_007760  Adeh_1132  Acyl-CoA dehydrogenase, type 1  41.76 
 
 
385 aa  273  3e-72  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
BN001305  ANIA_05270  acyl-CoA dehydrogenase (AFU_orthologue; AFUA_2G16630)  38.38 
 
 
425 aa  273  5.000000000000001e-72  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.85359  normal 
 
 
-
 
NC_011145  AnaeK_1192  acyl-CoA dehydrogenase domain protein  41.76 
 
 
385 aa  272  7e-72  Anaeromyxobacter sp. K  Bacteria  normal  0.0644386  n/a   
 
 
-
 
NC_009972  Haur_4761  acyl-CoA dehydrogenase domain-containing protein  40.21 
 
 
386 aa  269  7e-71  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4286  acyl-CoA dehydrogenase domain-containing protein  39.63 
 
 
379 aa  266  5e-70  Frankia sp. EAN1pec  Bacteria  normal  normal  0.330894 
 
 
-
 
NC_009656  PSPA7_5007  acyl-CoA dehydrogenase  39.16 
 
 
378 aa  258  9e-68  Pseudomonas aeruginosa PA7  Bacteria  normal  0.284133  n/a   
 
 
-
 
NC_014230  CA2559_00085  probable acyl-CoA dehydrogenase  34.05 
 
 
386 aa  258  9e-68  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3850  acyl-CoA dehydrogenase domain protein  40.05 
 
 
380 aa  254  1.0000000000000001e-66  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4927  acyl-CoA dehydrogenase domain protein  40.05 
 
 
380 aa  254  1.0000000000000001e-66  Ralstonia pickettii 12J  Bacteria  normal  normal  0.905693 
 
 
-
 
NC_009074  BURPS668_0071  acyl-CoA dehydrogenase  40.26 
 
 
378 aa  254  3e-66  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0285  putative acyl-CoA dehydrogenase  40.36 
 
 
430 aa  253  3e-66  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2118  acyl-CoA dehydrogenase domain-containing protein  38.4 
 
 
380 aa  252  6e-66  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.438957 
 
 
-
 
NC_007651  BTH_I0060  acyl-CoA dehydrogenase  39.74 
 
 
378 aa  252  9.000000000000001e-66  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1825  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  40 
 
 
378 aa  251  1e-65  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2728  long-chain specific acyl-CoA dehydrogenase  40 
 
 
378 aa  251  1e-65  Burkholderia mallei NCTC 10247  Bacteria  normal  0.890874  n/a   
 
 
-
 
NC_013411  GYMC61_2106  acyl-CoA dehydrogenase domain protein  37.63 
 
 
381 aa  251  1e-65  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008785  BMASAVP1_A3482  long-chain specific acyl-CoA dehydrogenase  40 
 
 
378 aa  251  1e-65  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0069  acyl-CoA dehydrogenase  40 
 
 
378 aa  251  2e-65  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4587  acyl-CoA dehydrogenase domain-containing protein  38.67 
 
 
380 aa  251  2e-65  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1015  acyl-CoA dehydrogenase domain-containing protein  37.17 
 
 
381 aa  250  3e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.629454 
 
 
-
 
NC_009439  Pmen_0898  acyl-CoA dehydrogenase domain-containing protein  37.73 
 
 
379 aa  247  2e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.592416  normal 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  40.21 
 
 
380 aa  246  4e-64  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009077  Mjls_4090  acyl-CoA dehydrogenase domain-containing protein  38.93 
 
 
380 aa  246  4e-64  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4696  Acyl-CoA dehydrogenase-like  37.73 
 
 
378 aa  246  6e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0700778  normal  0.0611001 
 
 
-
 
NC_009565  TBFG_12737  acyl-CoA dehydrogenase fadE20  37.43 
 
 
386 aa  244  1.9999999999999999e-63  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.416268 
 
 
-
 
NC_013440  Hoch_5486  acyl-CoA dehydrogenase domain protein  37.5 
 
 
381 aa  244  1.9999999999999999e-63  Haliangium ochraceum DSM 14365  Bacteria  normal  0.361587  normal  0.275815 
 
 
-
 
NC_008347  Mmar10_1546  acyl-CoA dehydrogenase domain-containing protein  38.11 
 
 
378 aa  243  3.9999999999999997e-63  Maricaulis maris MCS10  Bacteria  normal  0.295515  normal 
 
 
-
 
NC_009077  Mjls_4308  acyl-CoA dehydrogenase domain-containing protein  37.33 
 
 
380 aa  243  5e-63  Mycobacterium sp. JLS  Bacteria  normal  0.828452  normal 
 
 
-
 
NC_008146  Mmcs_4078  acyl-CoA dehydrogenase-like protein  37.33 
 
 
380 aa  243  5e-63  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4154  acyl-CoA dehydrogenase domain-containing protein  37.33 
 
 
380 aa  243  5e-63  Mycobacterium sp. KMS  Bacteria  normal  normal  0.815208 
 
 
-
 
NC_014210  Ndas_4164  acyl-CoA dehydrogenase domain protein  38.16 
 
 
380 aa  243  6e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2439  long-chain-acyl-CoA dehydrogenase  37.6 
 
 
391 aa  242  7e-63  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0991983  normal  0.0569635 
 
 
-
 
NC_013510  Tcur_1158  acyl-CoA dehydrogenase domain protein  37.53 
 
 
380 aa  242  7e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_24700  acyl-CoA dehydrogenase  38.54 
 
 
373 aa  242  7.999999999999999e-63  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.791758  normal 
 
 
-
 
NC_012793  GWCH70_1226  acyl-CoA dehydrogenase domain protein  35.48 
 
 
381 aa  241  1e-62  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  39.95 
 
 
375 aa  241  1e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_013757  Gobs_3923  acyl-CoA dehydrogenase domain protein  37.5 
 
 
381 aa  241  2e-62  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0526  acyl-CoA dehydrogenase domain-containing protein  36.91 
 
 
381 aa  241  2e-62  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0149792 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  38.52 
 
 
379 aa  241  2e-62  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2817  acyl-CoA dehydrogenase-like  37.43 
 
 
383 aa  239  4e-62  Rhodoferax ferrireducens T118  Bacteria  normal  0.0246434  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  39.68 
 
 
379 aa  239  5e-62  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3613  acyl-CoA dehydrogenase domain-containing protein  38.67 
 
 
382 aa  239  5e-62  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  39.68 
 
 
375 aa  239  5.999999999999999e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_009077  Mjls_1503  acyl-CoA dehydrogenase domain-containing protein  39.08 
 
 
379 aa  238  1e-61  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  37.47 
 
 
376 aa  238  2e-61  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007952  Bxe_B2741  putative acyl-CoA dehydrogenase  38.62 
 
 
379 aa  237  2e-61  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0315  acyl-CoA dehydrogenase-like  36.56 
 
 
391 aa  237  2e-61  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  36.63 
 
 
381 aa  237  3e-61  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  36.63 
 
 
376 aa  236  3e-61  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.63 
 
 
376 aa  237  3e-61  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1526  acyl-CoA dehydrogenase domain-containing protein  38.87 
 
 
379 aa  237  3e-61  Mycobacterium sp. KMS  Bacteria  normal  0.862011  normal 
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  36.63 
 
 
376 aa  237  3e-61  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  36.63 
 
 
376 aa  236  3e-61  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2118  acyl-CoA dehydrogenase domain-containing protein  37.94 
 
 
382 aa  237  3e-61  Marinobacter aquaeolei VT8  Bacteria  normal  0.0463825  n/a   
 
 
-
 
NC_008146  Mmcs_1503  acyl-CoA dehydrogenase-like protein  38.87 
 
 
379 aa  237  3e-61  Mycobacterium sp. MCS  Bacteria  normal  0.96739  n/a   
 
 
-
 
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