Gene Rfer_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2817 
Symbol 
ID3964268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3118370 
End bp3119521 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content60% 
IMG OID637917636 
Productacyl-CoA dehydrogenase-like 
Protein accessionYP_524060 
Protein GI89901589 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0246434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA CCCCTGAACA CGAACAGATT GCCGACACGG TGCGCAAGTT TGTTGCCAAA 
GAGATCAATC CGCACCTGCC GCAGTGGGAA GCGGCGGGCC AGTTCCCGGC GCATGAATTG
TTCAAGAAGA TGGGCGACCT GGGGCTGCTG GGCATCAAGT ACCCGGTGGA ATACGGCGGC
ATGGGGCTGG ACTTCAGCTA CTCCATGGTG ATGGCCGAAG CGCTCGGTGA ATGCAATGCG
GGGGGCGTGC CGATGGCGAT TGGCGTGCAA ACCGATATGT GTACGCCGGC CTTGGCGCGC
TTTGGCTCCG ATGAGCTCAA ACGCGAGTTT TTGGCCCCCA GCATCGCCGG GGACATGGTG
GGTTGTATTG GCGTCAGTGA GGTCGGCGGT GGCTCGGATG TGGCGGCGCT CAAGACCACG
GCCAAAAAGG ACGGTGATGA CTACCTGATC AACGGCTCCA AGATGTGGAT CACCAACGGC
ATGCAGGCAG ACTGGTGCTG TCTGCTGGCC AATACCTCGG AAGGCTCGGT GCACAAGAAC
AAGTCGCTGA TCATGGTGCG CCTGGACAGT CCCGGTGTCA CGCGGCAGAA GATCCACAAG
ATCGGCATGG ACTCATCCGA CACGGCGCAA TTGTTTTTTG ACAATGTGCG CGTGCCGCAA
CGCAACCTGA TCGGGCAGGA GGGTATGGGT TTCATGTTCC AGATGTTGCA GTTCCAGGAG
GAGCGGCTGT ATGGGGCCGC CGGCTGCCTG CGTTCGCTGG ACCGTTTGAT TGATCAAACC
ATTGACTACA CCCGTCAACG CCAGACCTTC GGCAAGCCGA TTCTGCACAA CCAGGTGGTG
CACTTCCGGT TGGCCGAGCT GCGCACCGAA GTCGAGGCCT TGCGCGCCTT GACCTATCGC
GCGGTCGAGT CCTATATCTC GGGCAAGGAC GTGACCCGGC TGGCTTCCAT GGCCAAGCTC
AAGGCCGGTC GCCTGAGCCG CGAGGTGGCC GACAGTTGCC TGCAGTACTG GGGCGGCATG
GGCTACACCA GGGACAACCC GATTTCGCAG GCTTACCGTG ACAGTCGTTT GATCTCGATT
GGCGGCGGTG CCGATGAGAT CATGCTGGGC ATCATCTGCA AGTTAGAGGG CACCCTGCCG
GGCAAGGGGT AA
 
Protein sequence
MKFTPEHEQI ADTVRKFVAK EINPHLPQWE AAGQFPAHEL FKKMGDLGLL GIKYPVEYGG 
MGLDFSYSMV MAEALGECNA GGVPMAIGVQ TDMCTPALAR FGSDELKREF LAPSIAGDMV
GCIGVSEVGG GSDVAALKTT AKKDGDDYLI NGSKMWITNG MQADWCCLLA NTSEGSVHKN
KSLIMVRLDS PGVTRQKIHK IGMDSSDTAQ LFFDNVRVPQ RNLIGQEGMG FMFQMLQFQE
ERLYGAAGCL RSLDRLIDQT IDYTRQRQTF GKPILHNQVV HFRLAELRTE VEALRALTYR
AVESYISGKD VTRLASMAKL KAGRLSREVA DSCLQYWGGM GYTRDNPISQ AYRDSRLISI
GGGADEIMLG IICKLEGTLP GKG