Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2817 |
Symbol | |
ID | 3964268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3118370 |
End bp | 3119521 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917636 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_524060 |
Protein GI | 89901589 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0246434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTCA CCCCTGAACA CGAACAGATT GCCGACACGG TGCGCAAGTT TGTTGCCAAA GAGATCAATC CGCACCTGCC GCAGTGGGAA GCGGCGGGCC AGTTCCCGGC GCATGAATTG TTCAAGAAGA TGGGCGACCT GGGGCTGCTG GGCATCAAGT ACCCGGTGGA ATACGGCGGC ATGGGGCTGG ACTTCAGCTA CTCCATGGTG ATGGCCGAAG CGCTCGGTGA ATGCAATGCG GGGGGCGTGC CGATGGCGAT TGGCGTGCAA ACCGATATGT GTACGCCGGC CTTGGCGCGC TTTGGCTCCG ATGAGCTCAA ACGCGAGTTT TTGGCCCCCA GCATCGCCGG GGACATGGTG GGTTGTATTG GCGTCAGTGA GGTCGGCGGT GGCTCGGATG TGGCGGCGCT CAAGACCACG GCCAAAAAGG ACGGTGATGA CTACCTGATC AACGGCTCCA AGATGTGGAT CACCAACGGC ATGCAGGCAG ACTGGTGCTG TCTGCTGGCC AATACCTCGG AAGGCTCGGT GCACAAGAAC AAGTCGCTGA TCATGGTGCG CCTGGACAGT CCCGGTGTCA CGCGGCAGAA GATCCACAAG ATCGGCATGG ACTCATCCGA CACGGCGCAA TTGTTTTTTG ACAATGTGCG CGTGCCGCAA CGCAACCTGA TCGGGCAGGA GGGTATGGGT TTCATGTTCC AGATGTTGCA GTTCCAGGAG GAGCGGCTGT ATGGGGCCGC CGGCTGCCTG CGTTCGCTGG ACCGTTTGAT TGATCAAACC ATTGACTACA CCCGTCAACG CCAGACCTTC GGCAAGCCGA TTCTGCACAA CCAGGTGGTG CACTTCCGGT TGGCCGAGCT GCGCACCGAA GTCGAGGCCT TGCGCGCCTT GACCTATCGC GCGGTCGAGT CCTATATCTC GGGCAAGGAC GTGACCCGGC TGGCTTCCAT GGCCAAGCTC AAGGCCGGTC GCCTGAGCCG CGAGGTGGCC GACAGTTGCC TGCAGTACTG GGGCGGCATG GGCTACACCA GGGACAACCC GATTTCGCAG GCTTACCGTG ACAGTCGTTT GATCTCGATT GGCGGCGGTG CCGATGAGAT CATGCTGGGC ATCATCTGCA AGTTAGAGGG CACCCTGCCG GGCAAGGGGT AA
|
Protein sequence | MKFTPEHEQI ADTVRKFVAK EINPHLPQWE AAGQFPAHEL FKKMGDLGLL GIKYPVEYGG MGLDFSYSMV MAEALGECNA GGVPMAIGVQ TDMCTPALAR FGSDELKREF LAPSIAGDMV GCIGVSEVGG GSDVAALKTT AKKDGDDYLI NGSKMWITNG MQADWCCLLA NTSEGSVHKN KSLIMVRLDS PGVTRQKIHK IGMDSSDTAQ LFFDNVRVPQ RNLIGQEGMG FMFQMLQFQE ERLYGAAGCL RSLDRLIDQT IDYTRQRQTF GKPILHNQVV HFRLAELRTE VEALRALTYR AVESYISGKD VTRLASMAKL KAGRLSREVA DSCLQYWGGM GYTRDNPISQ AYRDSRLISI GGGADEIMLG IICKLEGTLP GKG
|
| |