Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0668 |
Symbol | |
ID | 5151966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 678850 |
End bp | 679989 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555670 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_001236842 |
Protein GI | 148252257 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.11454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAGA GTCCGTTCTA CACGGCCGAG CACGAGGCCT TCCTCGACGT GGTCAGGCGA TTCGTCGAGA AGGAGATCGC CCCGTTCGCG AGCGCGTGGG ACGAGGCCGG TGAGTTCCCG CGCGCGCTGT ACGCGAAAGC CGCCGAGATC GGCCTGCTCG GACTCGGCTT TCCGGAGGAG TTCGGCGGTG TCCCGGCCGA CCAGTTCATG CACATCGTCG CCTCGCAGGA GCTGGCCCGT GCGGGCGCCG GCGGCGTCAG CGCCAGCCTG ATGAGCCATT CGATCGGTGC GCCGCCGATC GCGCGCGCGG CGAGGCCGGA GGTCCGCGCC AGGGTGCTGC CGGAGATCCT TGCGGGACGG AAAATCTCGG CGCTCGCGAT CACCGAGCCG AGTGGCGGCT CGGATGTCGC CAATCTCCGG ACCAAGGCCG TCCGCGATGG CGATCATTAT GTCGTCAGCG GCGAGAAGAC CTTCATCACC TCGGGCATGC GCGCGGACTA TATCACCGTC GCGGTGCGCA CCGGCGGCCC AGGGCCGTCC GGGGTGAGCC TGCTGCTCGT TCCTGGCGAC ACGCCCGGGC TGACGCGCAC CAAGCTGAAC AAGATGGGCT GGTGGGCGTC GGATACGGCC ACCCTGCATT TCGACGGCTG CCGGGTGCCG ATCGAGAACC TGATCGGCGA GGAAGGGCAG GGCTTCAAGC TGATCATGCA CAATTTCAAC AGCGAGCGGA TGGGCATGGC GGCGAGCTGC ACGGCGTTCG CCCGCGTCTG CCTGGAGGAT GCGATCGCCT ATGCCAAGGA GCGGCACACC TTCGGCAAGC CCTTGGCGCA GCATCAGGTC ATCCGGCACA AGCTGGTCGA CATGGCGCAG CGCGTGGCGG CCTCGCAGGC GATGCTGGAG ATGCTGGCGT GGCGGCTCGA ACAGGGCGAT AATCCCGTTG CCGAGATCTG TATGATGAAG AACCAGGCGA CGCAGACCAT GGCCTGTTGC GCTTCCGAGG CAGTGCAGAT CTTCGGCGGC GCCGGCTTCA TGCGCGGCAT TCGCGTGGAA CGCATCTACC GCGAGGTCAA GGTCAACGCG ATCGGCGGCG GCACCGAGGA GATCATGAAG GACCTGGCCA GCCGCCAGAT GGGATTGTGA
|
Protein sequence | MTKSPFYTAE HEAFLDVVRR FVEKEIAPFA SAWDEAGEFP RALYAKAAEI GLLGLGFPEE FGGVPADQFM HIVASQELAR AGAGGVSASL MSHSIGAPPI ARAARPEVRA RVLPEILAGR KISALAITEP SGGSDVANLR TKAVRDGDHY VVSGEKTFIT SGMRADYITV AVRTGGPGPS GVSLLLVPGD TPGLTRTKLN KMGWWASDTA TLHFDGCRVP IENLIGEEGQ GFKLIMHNFN SERMGMAASC TAFARVCLED AIAYAKERHT FGKPLAQHQV IRHKLVDMAQ RVAASQAMLE MLAWRLEQGD NPVAEICMMK NQATQTMACC ASEAVQIFGG AGFMRGIRVE RIYREVKVNA IGGGTEEIMK DLASRQMGL
|
| |