| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4761 |
|---|
| Symbol | |
|---|
| ID | 5736605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 6067078 |
|---|
| End bp | 6068238 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641281926 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001547520 |
|---|
| Protein GI | 159901273 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCT ATTTTAACGC TGAGCATGAA CTGTTTCGCC AAACGATCCG GCGGTTTGTT
GAACGCGAAA TTAACCCCTT TGTCGAGCAA TGGGAGCATG AGCGGGCTTT TCCTGGCCAT
GCCTTATTCA AAAAATTAGG TGAATTAGAT GCGTTGGGTG TTTCGTACCC CGAAGCCTAT
GGTGGTGCAG GCTTAGATTA TTGGTATAAC GTGGTGTTGG CCGAGGAATT AGGCTATGCT
GATTGTGGTG GCGTGCCCAT GGCGATTGCG GTGCATACCG ATATGGCTAC GCCCGCCTTG
GCCGAATTTG GCAGCGACGA GTTACGTCAG CGCTTTTTGG CTCCCGCAAT TCGTGGCGAA
ATGATTGCGG CGGTGGCAAT TTCCGAGCCT GATGCTGGCT CCGATGTCGC GGCGATTCGC
ACGCGGGCGG TACGCGATGG CGATGAGTAT GTGATCAACG GCCATAAAAT GTGGATCACC
AATGGTACAC AGGCCGATTT TATTACGCTT TTGGCCCGCA CCAGCGACGA ACCTGGCTAT
AAATCCATGT CGTTGCTGAT TGTCCCAACC AACACCCCAG GCTTTCATGT TTCCAAGAAA
TTAGAGAAAT TGGGCAATCA TTCCAGCGAT ACTGCATTGT TGGCGTTTGA CGATGTGCGC
GTGCCAGTCG CCAATCGCAT CGGTGATGAA GGCCAAGGCT TTGTACTGCA AATGCAGCAA
TTTCAAAAAG AACGCTTGAT TGGCGCGGTT TCGGCGGTTT CGGCCATGGA ACGCATCGTT
GAAATGACCA GCCACTATTG CCGTGAGCGC CAAACATTTG GCAAGCCCTT GATTGAAAAC
CAATATATTC AATTTCGCTT GGCTGAGTTA TTGACCGAGA TTGAGGCATT GCGCCAACTC
AATTATCACT GCACCCGTCT GCTTTTGGCA GGCCACGACA TCACCAAAGA GGTTTCAATG
GCCAAACTCA AGGCTGGGCG TTTGGCTCGT GAAGTTGCTG ATACATGTTT ACAATTCCAC
GGCGGCATGG GCTATGTTGA AGAATACCCG ATGGCCCGCT ATTTTCGTGA TGCCCGTTTG
CTGTCAATCG GCGGTGGCGC TGATGAAATT ATGCTGGGAA TTATCGCCAA ATATGCGGGT
TTGTCGCGCA AACGTGGTTA G
|
|---|
| Protein sequence | MSLYFNAEHE LFRQTIRRFV EREINPFVEQ WEHERAFPGH ALFKKLGELD ALGVSYPEAY
GGAGLDYWYN VVLAEELGYA DCGGVPMAIA VHTDMATPAL AEFGSDELRQ RFLAPAIRGE
MIAAVAISEP DAGSDVAAIR TRAVRDGDEY VINGHKMWIT NGTQADFITL LARTSDEPGY
KSMSLLIVPT NTPGFHVSKK LEKLGNHSSD TALLAFDDVR VPVANRIGDE GQGFVLQMQQ
FQKERLIGAV SAVSAMERIV EMTSHYCRER QTFGKPLIEN QYIQFRLAEL LTEIEALRQL
NYHCTRLLLA GHDITKEVSM AKLKAGRLAR EVADTCLQFH GGMGYVEEYP MARYFRDARL
LSIGGGADEI MLGIIAKYAG LSRKRG
|
|---|
| |