Gene Caul_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1874 
Symbol 
ID5899329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2010478 
End bp2011641 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID641562364 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001683501 
Protein GI167645838 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.33835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC CCTTCGCGCC CCAGTCGATG GAGTTCGGCC TGGGCGAAAC CGTCGACATG 
ATCCGCGATA CGACCGCGCG CTGGGCCGCC GACCGTCTGG CGCCGCGCGC CGCCGAGATC
GATGCGACCA ACACCTTCGC TCGCGACCTG TGGCCGGAGA TGGGTGAGCT GGGCCTGCAC
GGCATCACGG TCGAGGAAGA GTTCGGCGGC CTGGGTTTGG GCTATCTGGA ACATGTCGTG
GCGATGGAGG AGGTGTCCCG CGCCTCGGCC TCGATCGGCC TCAGCTACGG CGCCCACTCC
AATCTGTGCG TCAACCAGAT CCGCCGCTGG GGCACGCCCG AACAGAAGCG GAAATACCTG
CCCGGGCTGA TTTCAGGCGA GCATCTGGGG TCGCTGGCCA TGTCGGAGGC CGGATCGGGC
TCGGACGTCA TGTCGATGCG GACGCGCGCC GAGAAGAAGG GCGACCGCTA CATCCTGAAC
GGCACGAAGT TCTGGATCAC GAACTCGCCC ACCGCCGACA CCCTGGTCGT CTACGCGCGG
ACGGGGGAGG GCAATGGCGG CGTCAGCACC TTCTTGATCG AGAAGGGGAT GAGGGGCTTC
AGCGTCAGCA AGAAGCTCGA CAAGTTCGGC ATGCGCGGAT CAGACACGGC CGAGCTGGTG
TTCGAGGACT GCGAGGTCCC GGCGGAAAAC GTCATGGGCC CGGTCGGCGG CGGCGCGGGG
ATATTGATGA GCGGCCTGGA CTACGAGCGC ACGGTCCTGT CCGGCGGGCC GCTCGGTATC
ATGCAGGCCT GTCTGGACGT GGTGCTGCCC TATGTTCGCG AGCGCAAGCA GTTCGGCAAG
GCGATCGGCT CCTTCCAGCT CATGCAGGCC AAGGTCGCCG ACATGTACGT CGCTTTGAAT
TCTGCCCGGG CCTACGTCTA TGCGGTGGCG CGGGCCTGTG ACGCGGGCAA GACCACGCGG
TTCGACGCGG CCGGCGCGAT CCTGCTGGCT TCGGAAAACG CCGTGAGAGT CAGCCTGGAG
GCCGTGCAAG CCCTCGGGGG CGCTGGCTAT ACCAAGGAGT GGCCGGTCGA ACGGTTCGTC
CGTGACGCCA AGCTCTATGA TATCGGGGCC GGCACCAACG AGATCCGCCG CTTCCTGATC
GGCCGTGAGT TGCTGGGCTC GTGA
 
Protein sequence
MSIPFAPQSM EFGLGETVDM IRDTTARWAA DRLAPRAAEI DATNTFARDL WPEMGELGLH 
GITVEEEFGG LGLGYLEHVV AMEEVSRASA SIGLSYGAHS NLCVNQIRRW GTPEQKRKYL
PGLISGEHLG SLAMSEAGSG SDVMSMRTRA EKKGDRYILN GTKFWITNSP TADTLVVYAR
TGEGNGGVST FLIEKGMRGF SVSKKLDKFG MRGSDTAELV FEDCEVPAEN VMGPVGGGAG
ILMSGLDYER TVLSGGPLGI MQACLDVVLP YVRERKQFGK AIGSFQLMQA KVADMYVALN
SARAYVYAVA RACDAGKTTR FDAAGAILLA SENAVRVSLE AVQALGGAGY TKEWPVERFV
RDAKLYDIGA GTNEIRRFLI GRELLGS