Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0319 |
Symbol | |
ID | 5207254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 406542 |
End bp | 407693 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640593945 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001274701 |
Protein GI | 148654496 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.339666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0442463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTG ATCTGACTCC TGAACATCAG CGTATTCGCG CAGAAGTACG ACGCTTCGCC GAGCAGGAGA TTGCTCCACG CGCCCGTCAC GTCGATGAGA CGGGAGAGTT CCCGGCAGCA ACCCTGCGAA AAATGGCGGA ACTGGGTCTG ATGGGTTTGC CGTTCCCTGA AGAGTATGGG GGCGCCGGCG CCGACAGTAT TTCGACGGCG ATTGCAATCG AAGAGGTTGC CCGCGCCTGC GGCTCTACAG CGCTGATTTA CTCCGCGCAT CTTGGGCTGG GGTGTGCGCC GATTGCCATG TTCGGCACCG AGGAACAGAA ACGACGCTTT TTGCGACCGG CCGCCGAGGG ACGGCATTTA GGCGCATTTG CGCTAACAGA ACCGCACGCC GGTTCTGATG CTGGCGCCAC CCGCACAACC GCGCGGCTCG AAAACGGAGA GTGGGTGATC AACGGCGCGA AGATGTGGAT TACAAGCGCC TCGGTTGCCG GGCATCTGAT TGTCACGGCG GTGACCGATC CGGGGGAGCG CCACTCGATC AGCGCTATTA TTGTGCCCGC CGGAACGCCG GGGTTGAGTT TTGGCAAACC GGAAGCCAAG ATGGGGTTGC GTGGCTCAAT CACGAATGCG GTGACCTTCG AGGACGTGCG GGTGCCTGAA GAGAATCTGC TGGGACGACG CGGGCGCGGT TTGCAGCAGT TCCTGGCTGT GCTCGACGGT GGGCGCATTG GGATCGGAGC GATGGCAATC GGGCTGGCGC AGGCGGCGTT CGAGATTGCA TCCGCCTATG CGCGTGAACG TACTGCCTTT GGCAAACTCA TCGGCGCTTA CGAGTCGGTC TCGAACATGA TCGCCGACAT GGCGGTGGGG CTGGAAGCGG CGCGATTGCT GGTGTATCAG GCGGCGTGGT TGAAAGACCA GGGACGCCAG TACAGCCGTG AGGCGGCGAT TGCCAAACTG TACGCCTCGG AGGTTGGCGA GAAAATCTGC CGCGACGCTA TTCAGGTGCT CGGCGGGTAC GGCTACAGCA GCGAATATCC GCTCGAACGC ATCTACCGCG ATCAGCGCCT GCTTACCATC GGCGAAGGAA CGTCGGAAAT CCTGCGTGTG GTGATCGCCC GCCAGATTCT GGGAGAGTTC GTTGGACGGT GA
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Protein sequence | MNFDLTPEHQ RIRAEVRRFA EQEIAPRARH VDETGEFPAA TLRKMAELGL MGLPFPEEYG GAGADSISTA IAIEEVARAC GSTALIYSAH LGLGCAPIAM FGTEEQKRRF LRPAAEGRHL GAFALTEPHA GSDAGATRTT ARLENGEWVI NGAKMWITSA SVAGHLIVTA VTDPGERHSI SAIIVPAGTP GLSFGKPEAK MGLRGSITNA VTFEDVRVPE ENLLGRRGRG LQQFLAVLDG GRIGIGAMAI GLAQAAFEIA SAYARERTAF GKLIGAYESV SNMIADMAVG LEAARLLVYQ AAWLKDQGRQ YSREAAIAKL YASEVGEKIC RDAIQVLGGY GYSSEYPLER IYRDQRLLTI GEGTSEILRV VIARQILGEF VGR
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