18 homologs were found in PanDaTox collection
for query gene Ping_3252 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008709  Ping_3252  Type IV pili fiber-building block protein  100 
 
 		 193 aa  385  1e-106  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_0851  hypothetical protein  32.97 
 
 		 185 aa  89.7  2e-17  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3427  prepilin-type cleavage/methylation-like protein  31.46 
 
 		 180 aa  84.7  7e-16  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3315  prepilin-type cleavage/methylation-like protein  31.46 
 
 		 180 aa  84.3  9e-16  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_0707  prepilin-type cleavage/methylation-like protein  31.46 
 
 		 180 aa  84.3  0.000000000000001  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_0827  prepilin-type cleavage/methylation-like protein  28.65 
 
 		 189 aa  76.6  0.0000000000002  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0850  prepilin-type cleavage/methylation-like protein  25.84 
 
 		 185 aa  70.1  0.00000000002  Shewanella baltica OS223  Bacteria  normal  1  normal  0.764335 
 
 
-
 
NC_009997  Sbal195_0862  prepilin-type cleavage/methylation-like protein  25.84 
 
 		 189 aa  68.2  0.00000000007  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013889  TK90_0212  type IV pilus assembly protein PilW  28.57 
 
 		 344 aa  45.8  0.0003  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  0.041624 
 
 
-
 
NC_008740  Maqu_0868  Tfp pilus assembly protein PilW-like  33.33 
 
 		 429 aa  45.8  0.0004  Marinobacter aquaeolei VT8  Bacteria  normal  0.0553182  n/a   
 
 
-
 
NC_008340  Mlg_0859  prepilin-type cleavage/methylation-like protein  22.03 
 
 		 212 aa  44.7  0.0008  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1088  type IV pilus assembly protein PilW  37.88 
 
 		 329 aa  44.7  0.0008  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2718  type IV pilus assembly protein PilW  36.36 
 
 		 323 aa  44.7  0.001  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_0255  prepilin-type cleavage/methylation-like protein  25.97 
 
 		 226 aa  43.5  0.002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_0190  type-4 fimbrial biogenesis transmembrane protein precursor  27.54 
 
 		 242 aa  42.7  0.003  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.492835 
 
 
-
 
NC_009092  Shew_1104  prepilin-type cleavage/methylation-like protein  28.03 
 
 		 328 aa  42.7  0.004  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_1380  hypothetical protein  31.96 
 
 		 385 aa  42  0.006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.175236  normal  1 
 
 
-
 
NC_003295  RSc0726  hypothetical protein  31.78 
 
 		 328 aa  41.2  0.01  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
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