| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0707 |
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| Symbol | |
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| ID | 4251148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 821068 |
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| End bp | 821610 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117270 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_732844 |
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| Protein GI | 113969051 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTAA GCGCGAAAAA ACAGCAAGCG GGCTTTAGCT TATCTGAGCT GATGATCGCT
ATGGTGCTTG GGCTGATTAT TATGCTGGCC GTGGTCAACT TTTTCGCCCC GCTCAAGGCC
ACTGTTGAAG AAAGTAAACG CCTCGAAAAC GCTGCCGATG CGCTGAGATA CGCCACCCTT
AGCCTCAGCA AGAGCGTCAA ACGTGCCTCA AATATCGTAT CCCTCAGCGC GAATGAGTTA
GTGCTGGCAG TTGCAGCATC CCCAGCCCAA CCGAGTTTAA CTTGCCTAGG AACCAGCAAA
ACCAGTGATT ACAACGAAAC CTACCGTTTT AACGCCCCTA ATTTAAGCTG TGACGACGGC
GATGGCGCCC AGGTGTTACT CACGGGGCTA GAATCGACCC GTTTTACACT GAATGGCGAA
CTGGTGACTG TAATACTCAA GCCCGAAAAA CTCCCCGCGC AATATGGCCA AGGGATCCAG
CTCGATATCG CCCTGCGTAA ACCCCTATGG CAACAAGCCC TCAACAGCCA ACAGAACCCA
TAA
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| Protein sequence | MSLSAKKQQA GFSLSELMIA MVLGLIIMLA VVNFFAPLKA TVEESKRLEN AADALRYATL
SLSKSVKRAS NIVSLSANEL VLAVAASPAQ PSLTCLGTSK TSDYNETYRF NAPNLSCDDG
DGAQVLLTGL ESTRFTLNGE LVTVILKPEK LPAQYGQGIQ LDIALRKPLW QQALNSQQNP
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