| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0850 |
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| Symbol | |
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| ID | 7088086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 995777 |
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| End bp | 996334 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643459764 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_002356791 |
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| Protein GI | 217972040 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.764335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTTCAG CTCATCACAC TCAATGGAGA CACATTAAAC CCGCCTTAAG ACAATCGGGG
TTTAGCTTAT CCGAACTGAT GATTGCCATG GTATTAGGCC TGATCATCAT GATCGCTGTG
ATCAATTTCT TTGCGCCACT TAAGGCCACC GTTGAGGAAA GTAAACGTCT AGAAAATGCC
GCTGACGCCT TAAGATACGC CACGCTAACG CTCAGTAAAA GCATCAAACA GGCTGATAAC
GTCGCAAATG TATCGGCTAA CGAACTCGTC TTAAGCACGC GCGCCTCCGC AAGCCAACCA
AGTATTAGCT GTTTAGGCCA AAGTAAAACC GCTGATTATA TTGAAACATT TAGCTTTATG
GCACCTAACT TATCCTGCAA CGATGGTGAT GGCGCGCAAA CACTCCTCAC CGGGCTAGAA
GCGGCTCACT TCTCTCAAGC TGGTGAACTC GTCAGTATCA ATCTGAAGCC CTTAGCTTTG
CCGACGCAAT ATGGTCAGGG TATTAGCTTG CAGGTCGCAC TGCGTAAACC CCTTTGGCAA
CAAGCCATTA ATTCATAA
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| Protein sequence | MISAHHTQWR HIKPALRQSG FSLSELMIAM VLGLIIMIAV INFFAPLKAT VEESKRLENA
ADALRYATLT LSKSIKQADN VANVSANELV LSTRASASQP SISCLGQSKT ADYIETFSFM
APNLSCNDGD GAQTLLTGLE AAHFSQAGEL VSINLKPLAL PTQYGQGISL QVALRKPLWQ
QAINS
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