| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1380 |
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| Symbol | |
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| ID | 6475235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1569833 |
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| End bp | 1570990 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642730548 |
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| Product | hypothetical protein |
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| Protein accession | YP_002027768 |
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| Protein GI | 194365158 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.175236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCGT CTTCGCGAAT CCGCGGCCTG TCGCTGATCG AACTGATGAT CGCCATGGTC
ATCGGCCTGG TGTTGATGCT GGGCATCACC CAGATATTCA TTGCGTCCCG CGCGGCGTCG
CGCCTGTCCG AGGGCGCTGC CCGCACCCAG GAGAATGCCC GCTTCGCGTT GGATTTCCTG
CAGCGCGACC TGCGCATGGC CGGTCATTTC GGTTGCGTGA ACGACCAGGC ACATGTGATC
AAGAACACGG GCGATGTCCG CTACAACCTG GGAATCGCTT CCGGCAGCGG TGATCCTCTG
GACTTCTCTG TACCGGTACA GGGCTATGAA GCTGCCGGCA CCGCGCCGAC CAACACCCTG
ACCCTGGGTC GGGCATGGAG TGCCGCAGGC TCGGTGCCCA AAAGCATCAC CGATCTGAAG
CCGAAGCCGC TGCCCGGCAG CGACATTCTC GTGCTGCGGC TGCTGAGCCC GGAGGGAGCC
GTGCTTGCAT CGGCAAGCGT GGACGGTACC GCCACCACGT TGACCGTATC CAGCGACGGC
ATGGCGCGTC TCAAGGCCAA TGCCGCGGGT ACTCCCACCG TATTCGCGCT TGCAGACTGC
ACCCGTGCCG ACGTGTTCTC GGGCGCCATC ACTGGTTCTA CGGTAAAGGT CGACAAGGTC
GACCTCACGG GTTACTCGGT CAACAACGCG ATGACCATGC TGTACCGCGC CGATGGCCTG
GTGTACTACA TCGCGACCAA CGGCAACAAC GAGCCATCGC TGTTCCGGGC ACGTGCCAAT
GGCGCGGGTG GTTACGGTGC CGGCGAGGAG CTGGTGGAGG GCATCGAGAA CATGCAGGTC
CTGTACGGCC TGGATGCGAC GACCGACATC GCTCTGGCTA CGCCGCCCAC CGGGCGCATC
GTCGATCAAC GTGTAGCCAG CAGTGTCAGT ACCGCTACCG ATGCGACGGC AACTGCCGCG
TGGCGGCGCG TCGGCATGGT GCAGGTCGGT CTGCTGGCCA GGAGCCCGCA GCGCGCTTCG
GCCGAAGCAC CGGGTACGGC CGACAACTAT CTGGGCGTGC TCGGGGTGAC CATCGCGCCG
GGCGATCCCT ATGATCAGCG TCATCGCGGG GCCTATGAAG TCTCCGTTGC GCTTCGCAAC
CGCCTGTTCG GGAACTGA
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| Protein sequence | MSPSSRIRGL SLIELMIAMV IGLVLMLGIT QIFIASRAAS RLSEGAARTQ ENARFALDFL
QRDLRMAGHF GCVNDQAHVI KNTGDVRYNL GIASGSGDPL DFSVPVQGYE AAGTAPTNTL
TLGRAWSAAG SVPKSITDLK PKPLPGSDIL VLRLLSPEGA VLASASVDGT ATTLTVSSDG
MARLKANAAG TPTVFALADC TRADVFSGAI TGSTVKVDKV DLTGYSVNNA MTMLYRADGL
VYYIATNGNN EPSLFRARAN GAGGYGAGEE LVEGIENMQV LYGLDATTDI ALATPPTGRI
VDQRVASSVS TATDATATAA WRRVGMVQVG LLARSPQRAS AEAPGTADNY LGVLGVTIAP
GDPYDQRHRG AYEVSVALRN RLFGN
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