Gene SO_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0851 
Symbol 
ID1168698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp873944 
End bp874501 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content48% 
IMG OID637342821 
Producthypothetical protein 
Protein accessionNP_716482 
Protein GI24372440 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4966] Tfp pilus assembly protein PilW 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAGGCT TAGCAATGTC GCCTTTCAAT AAGCAACAAC AGGCGGGTTT TAGCTTATCA 
GAGCTGATGA TAGCGATGGT GTTGGGGCTG ATCATTATGC TCGCTGTAGT CAATTTTTTT 
GCCCCGCTCA AGGCGACTGT AGAAGAAAGC AAACGCCTAG AAGATGCGGC TGATGCGCTA 
AGATATGCAA CTCTCACGCT TAGCAAGAGT GTCAAACGCT CATCCCATAT TGCATCGCTC 
AGCGCGAACG AGTTGGTCCT TGTGGTTGTA GCATCACCCA CACAACCCAG TTTAAGTTGT 
TTAGGCACAA ACAAAACCAG TGATTACAAC GAAACCTATC GTTTTTCAGC CCCAAATCTG 
AGCTGTGACG ACGGTGATAG CGCCCAAATT TTATTAACGG GGCTTGAATC AACCCACTTT 
ACGCTAAATG GCGAGTTGCT CACGGTACAA CTCAAACCGG AGAAGCTTCC GGCACAATTT 
GGCCAAGGTA TAAAGCTCGA TATCGCACTG CGCAAAAGCG TTTGGCAGCA AGCGCTCAAC 
CGCCAACAAA TCCAATAA
 
Protein sequence
MSGLAMSPFN KQQQAGFSLS ELMIAMVLGL IIMLAVVNFF APLKATVEES KRLEDAADAL 
RYATLTLSKS VKRSSHIASL SANELVLVVV ASPTQPSLSC LGTNKTSDYN ETYRFSAPNL 
SCDDGDSAQI LLTGLESTHF TLNGELLTVQ LKPEKLPAQF GQGIKLDIAL RKSVWQQALN 
RQQIQ