| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0255 |
|---|
| Symbol | |
|---|
| ID | 4268732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 287676 |
|---|
| End bp | 288356 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638124980 |
|---|
| Product | prepilin-type cleavage/methylation-like protein |
|---|
| Protein accession | YP_741100 |
|---|
| Protein GI | 114319417 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4966] Tfp pilus assembly protein PilW |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGTT ATTCTTACAG GCGGCACAAA GGGTTCTCCT TGGTGGAGCT CATGATCGGG
CTCCTGATCG GGACGCTGTT AGTGGGCGGA GTGGTTGCCG TCTTCGTGAA CGCTATGGCG
AGTTTTGAGC GCCAGCGGGA GGTTGACCGG TCGCAGGAGT CCCTGCGCTA CGCGGTGAAC
TTCCTGGTGC GTGAACTACG ACAGGTTAGC GCTGGGGGAG GTGACTTCGG TGTTGTCAAT
CCCGGTTTGG AAGTGGAAGC GGCCCCAGAT GCAGCAAGAG GGCATCGTAT TACCGTTCGA
TATCAGGTGT TCGACGATGG AGAGGCCCAG TCCTGTCGGG GTGATGATCT GGCGGAGGGT
GACGAGGCAG AGAAAAGCTT CTTCGTTGGA ACCCCCACTG GCGAGCCCCT TTTGATTTGT
GAGGATGACG ACGGTGAGAC ACCTATCGCC TTCGGTTTAA ATGCGTTGAC CGTAGTGGCG
TTGATGGTCG ATGACAATCA GGACGGCGAT TACGAGGTCG AGGATGATCC GGATTCGGGG
TGGTTTGATG GCAGCGAGGC GCTCGATGAC GTCATCGGGC TTCGTCTCGA ATTCGGGCAG
CAATGGGTGG ATGAGCAGAC GCGCCCAGTC GAGGTCACGG TAGGCTTGCG AAACCGGATC
TTTCAGCGCT TGCTGGAATG A
|
|---|
| Protein sequence | MTRYSYRRHK GFSLVELMIG LLIGTLLVGG VVAVFVNAMA SFERQREVDR SQESLRYAVN
FLVRELRQVS AGGGDFGVVN PGLEVEAAPD AARGHRITVR YQVFDDGEAQ SCRGDDLAEG
DEAEKSFFVG TPTGEPLLIC EDDDGETPIA FGLNALTVVA LMVDDNQDGD YEVEDDPDSG
WFDGSEALDD VIGLRLEFGQ QWVDEQTRPV EVTVGLRNRI FQRLLE
|
|---|
| |