| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2718 |
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| Symbol | |
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| ID | 4019237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3255599 |
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| End bp | 3256570 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637956764 |
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| Product | type IV pilus assembly protein PilW |
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| Protein accession | YP_563720 |
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| Protein GI | 91794069 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTTCA TAAACGTGAT CCAAGTTAAG CAATTGGGCT TCTCATTAGT TGAGTTGATG
GTGTCTATGG TAATTAGCCT ATTTTTAACC TTGGGCATAT TTACCATGTT TAACATGTCA
TCAACCAATG TGACTACCAC GAGTCAATTT AGCCAGTTGC AAGAGAATGG ACGCATCGCC
TTGGCATTAA TGGAGCGTGA TTTAAGTCAG CTGGGTTTTA TGGGGGATAT AACGGGTACG
GGTCTCACTA CGGGAAACAC CAGCATATCG GCAACCCCTG TGGCAAATGA TTGTGTAGGT
GCTGGCATCA ATAATGCCAG CTTCCCTAAT AATCAGCCGG CTCACTTTAG GGTGCTTTGG
GGGTTTGAAC AAGGCGTCGG TGCGGGTAAT TTCCCCTGTT TTACTGCTAA AACTAATACG
GATGTTATTC AATTAAAACG TTTGATTGGT CCTTCAACCT TGGCAACTAC GGTCAGCCGT
TATTATGCTG CTGTGACGTC AGATCAACTG ACATTTTTTG ATGGTAGCGC AGCCGTCCCC
GCTATTGCTA ATAGCCGAGT TTGGGAATAT CAGCATCATA TTTATTTTAT TAACAATGAC
GGTACTATTC CGGTACTCAG ACGCAAAAAT CTCTCTATCG GTAATGGCAT GAACAACGAA
GAACAATTGG TTGAAGGCAT AGAAAACATG CGAATTCTCT ATGGCTTTGA CAATGATGGT
GATGATACTG CAGACAGCTA TATGCCAGTG CAAAATGTCA CAGATTTAAT GTGGGACAAT
CAGTTATTTC AACGATTAGT GTCACTGAAA GTATTTTTAT TAGTGCGCTC AATTCAGGAA
GATAAGAATT ATACCAATGA TGTGACCTAC AAATTGGGTG ATAAAACCCT CAGCGGTTTC
AATGATCATT ATCGGCGCAA GGTCGTATCC ACCACAATCG TGCTAGAGAA CCCTGTGCTC
ATCAGAAACT AA
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| Protein sequence | MRFINVIQVK QLGFSLVELM VSMVISLFLT LGIFTMFNMS STNVTTTSQF SQLQENGRIA
LALMERDLSQ LGFMGDITGT GLTTGNTSIS ATPVANDCVG AGINNASFPN NQPAHFRVLW
GFEQGVGAGN FPCFTAKTNT DVIQLKRLIG PSTLATTVSR YYAAVTSDQL TFFDGSAAVP
AIANSRVWEY QHHIYFINND GTIPVLRRKN LSIGNGMNNE EQLVEGIENM RILYGFDNDG
DDTADSYMPV QNVTDLMWDN QLFQRLVSLK VFLLVRSIQE DKNYTNDVTY KLGDKTLSGF
NDHYRRKVVS TTIVLENPVL IRN
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