| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0827 |
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| Symbol | |
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| ID | 5372699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 979088 |
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| End bp | 979657 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640829022 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_001365044 |
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| Protein GI | 152999363 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTTCAG CTCATCACAC TCAATGGAGA CACATTAAAC CCGCCTTAAG ACAATCGGGG
TTTAGCTTAT CCGAACTGAT GATTGCCATG GTATTAGGGC TGATCATCAT GATCGCTGTG
ATCAATTTCT TTGCGCCACT TAAGGCCACC GTTGAGGAAA GTAAACGTCT AGAAAATGCC
GCTGACGCCT TAAGATACGC CACGCTAACG CTCAGTAAAA GCATCAAACA GGCGGATAAT
GTCGCCCTTG TATCGGCTAA CGAACTCGTC CTAAGCACGC GTGCCTCCGC AAACCAACCG
AGTATTAGCT GTTTAGGCCA AAGTAAAACC GCTGATTACA CCGAAACCTT TAGCTTTTTA
GCACCTAACT TATCCTGCGA CGATGGTGAT AGTGCACAAA CGCTTCTCAC TGGGCTAGAA
GCGGCTCACT TCTCTCAAAC TGGTGAACTC GTCAGTATTA ATTTGAAACC CTTAGCTTTA
CCGACCCAAT ATGATCAGGG TATTAGCTTA CAGATCGCAC TGCGTAAACC TCTTTGGCAA
CAAGCCATTA ATTCACAACA AGTGCCATAG
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| Protein sequence | MISAHHTQWR HIKPALRQSG FSLSELMIAM VLGLIIMIAV INFFAPLKAT VEESKRLENA
ADALRYATLT LSKSIKQADN VALVSANELV LSTRASANQP SISCLGQSKT ADYTETFSFL
APNLSCDDGD SAQTLLTGLE AAHFSQTGEL VSINLKPLAL PTQYDQGISL QIALRKPLWQ
QAINSQQVP
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