| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0726 |
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| Symbol | |
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| ID | 1219532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 774209 |
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| End bp | 775195 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637237086 |
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| Product | hypothetical protein |
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| Protein accession | NP_518847 |
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| Protein GI | 17545445 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCA TTCGTCGTAT CCTGCCGCGT CGCACACGCG GCTTCTCGCT CGTGGAACTG
ATGGTGGCGC TGGTCATCGC GCTGCTGGTA CTGGCCGCGA CCGTGTCGTT CTATCTGATG
ACGCGTTCCA CCTACACCAC CATCGAAGAC ACCTCCGGCC TGGAAGAACG TGGCCAGTTC
GCGTTGAACG TGATGACACG CGTGCTGCGG CAGGCGGGTT TCACCAAGCT GAGCACCGAC
AACGGCGGCA TCATGCGGCT GTCGGCGTCG GATGCGCCCA TGCTTTCGGG GCTGGATGGC
TGTGTAGGGA AAGAGGCCGC CGCCAAAACG ACGGGGCCGG CCGCCGGGGA TTCGCTATCG
AGCTGCCTGT CCCCTCAAAC TTCGACCGGC AGCGATGCCA TCGAGGTCCG TTTCTTTGGG
GTCGGTACGG CTGCTGACCG TACCGTGCCG GACGGAACCA TGATCGACTG CTCGGGCCAA
GGCGTTGCGG ACTACACCTC GGTCGATCTG GCTGGCCAAC AGCGCGGCCT GTCCATCTTC
TACGTGCAGG TCGGCGCAGA TGGCAATTCA TATTTGGCGT GCAAATTCCG CAAACGGGAT
GCCGACGGCC ACGAGCCCAC CGATGCAACC AATGAGGACA ACTTCACCAC GCAGCAACTT
GTGCCCGGTG TCGAAGCTCT CCAGTTGCTC TATGGCGTCT CGACCACCGG CGACTCCACC
GTGCCGAATG TCTACAAACG CGCCAGCGAC ATGACCAGCG ACGACTGGAA CAAGGTCTAT
GCCGTCAAGG TGTCCATGGT GGTCCGCGCG GACAATGCGA GCGCCGATAC GACCGGCGGC
ACGCCCACTT ATACGCTCTT CGGCAACCAG TACACCAATG CCGACGGCAC CTTCAAGCCG
ACGGAAAAGC TGAACGTAGC CCGGCGCCTC TTCACCACGA CCGTACAAGT GCGCAACTAC
CTCGTCTGCC AAACATCATG CTCCTGA
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| Protein sequence | MRTIRRILPR RTRGFSLVEL MVALVIALLV LAATVSFYLM TRSTYTTIED TSGLEERGQF
ALNVMTRVLR QAGFTKLSTD NGGIMRLSAS DAPMLSGLDG CVGKEAAAKT TGPAAGDSLS
SCLSPQTSTG SDAIEVRFFG VGTAADRTVP DGTMIDCSGQ GVADYTSVDL AGQQRGLSIF
YVQVGADGNS YLACKFRKRD ADGHEPTDAT NEDNFTTQQL VPGVEALQLL YGVSTTGDST
VPNVYKRASD MTSDDWNKVY AVKVSMVVRA DNASADTTGG TPTYTLFGNQ YTNADGTFKP
TEKLNVARRL FTTTVQVRNY LVCQTSCS
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