Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3427 |
Symbol | |
ID | 4476770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4103149 |
End bp | 4103691 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639728036 |
Product | prepilin-type cleavage/methylation-like protein |
Protein accession | YP_871056 |
Protein GI | 117921864 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4966] Tfp pilus assembly protein PilW |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTAA GCGCGAAAAA ACAGCAAGCG GGATTTAGCT TATCAGAGCT GATGATCGCT ATGGTGCTTG GGCTGATTAT TATGCTGGCC GTGGTCAACT TTTTCGCCCC GCTCAAGGCC ACTGTTGAAG AAAGTAAACG CCTCGAAAAC GCTGCCGATG CGCTGAGATA CGCCACCCTC AGCCTCAGCA AGAGCGTCAA ACGTGCATCA AATATCGTAT CCCTCAGCGC GAATGAGTTA GTGCTCGCAG TTGCAGCATC CCCAGCCCAA CCGAGTTTAA CTTGCCTAGG AACCAGCAAA ACCAGCGATT ACAACGAAAC CTACCGTTTT GACGCCCCCA ATCTGAGCTG CGACGACGGC GATGGCGCTC AGGTGTTACT CACAGGGCTA GAATCGACCC GTTTTGCACT GAATGGCGAA CTGGTGACTG TAGTACTCAA GCCCGAAAAA CTCCCCGCGC AATATGGCCA AGGGATCCAG CTCGATATCG CCCTGCGTAA GCCCCTATGG CAACAAGCCC TCAACAGCCA ACAGAACCCA TAA
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Protein sequence | MSLSAKKQQA GFSLSELMIA MVLGLIIMLA VVNFFAPLKA TVEESKRLEN AADALRYATL SLSKSVKRAS NIVSLSANEL VLAVAASPAQ PSLTCLGTSK TSDYNETYRF DAPNLSCDDG DGAQVLLTGL ESTRFALNGE LVTVVLKPEK LPAQYGQGIQ LDIALRKPLW QQALNSQQNP
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