| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0190 |
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| Symbol | |
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| ID | 4036975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 197379 |
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| End bp | 198107 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637975562 |
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| Product | type-4 fimbrial biogenesis transmembrane protein precursor |
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| Protein accession | YP_582345 |
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| Protein GI | 94309135 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.492835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGACACC TTAGAAGAAC CAGATCACGC CAGGCGGGGG TATCGCTGGT GGAAATCATG
GTGGCGATGA TCATCGGGCT ATTCATGCTG TTGGCCCTGA GCACGCTGTT TCTCAATTTT
CGTGGCACCT TCAGGGATCA GGATCAACTG GCCCAGCTTC AGGACAATGA GCGCCTGGCG
CTGACCATGT TCTCCACCAC CATTCAGTCC GCGGGCTATT TTCCAGACCC CGTGAACAAT
GTGGTGACCG GCGCGTTGCC GCTATCGACG GGCAATGCCT ATGGCGACTT TGCCGCGGGG
CAGGCCGTGG TCGGTACGTC GGGTGCGAAC GGCGCAAGCG ATACGCTGAC TGCCCGTTTC
ATGACGGCCA ATGGCGATGG CATTCTCAAC TGTCAGGGTC AGTCCAATAC GTCCGGTGCC
AATGTGGTGT ACGTCAACAG TTTTGCAGTC AATGTGAACA ACGAACTGAC GTGTGCCATC
AATGGTGGCG CGGCGGTGCC GCTGGTCAGC GGCGTGACGG GATTCAGCGT CCTTTATGGA
ACAGACACCG CAAACGGTGG CAACGTCGAT CAGTATCTGT CCGCCGCCGC GGTGACCGCA
GCTGGGTACT GGCCCCAGGT CCGTACCGCG AGGGTGACGG TGACCTTCGT CAATCCGTAT
GCCACGCAAC CGAGCCAGCC GGCAACACTG AGCTGGACCC AGACGATCAG CTTGATGAAC
CGGTCATGA
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| Protein sequence | MRHLRRTRSR QAGVSLVEIM VAMIIGLFML LALSTLFLNF RGTFRDQDQL AQLQDNERLA
LTMFSTTIQS AGYFPDPVNN VVTGALPLST GNAYGDFAAG QAVVGTSGAN GASDTLTARF
MTANGDGILN CQGQSNTSGA NVVYVNSFAV NVNNELTCAI NGGAAVPLVS GVTGFSVLYG
TDTANGGNVD QYLSAAAVTA AGYWPQVRTA RVTVTFVNPY ATQPSQPATL SWTQTISLMN
RS
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