82 homologs were found in PanDaTox collection
for query gene Pecwa_3299 on replicon NC_013421
Organism: Pectobacterium wasabiae WPP163



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_1011  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  97.83 
 
 		 368 aa  750    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_3299  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  100 
 
 		 368 aa  762    Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_3103  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  82.07 
 
 		 368 aa  643    Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2912  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  78.26 
 
 		 368 aa  620  1e-176  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_1044  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  73.1 
 
 		 368 aa  574  1.0000000000000001e-162  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.131119 
 
 
-
 
NC_009436  Ent638_1987  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  72.83 
 
 		 367 aa  560  1e-158  Enterobacter sp. 638  Bacteria  normal  1  normal  0.130415 
 
 
-
 
NC_007963  Csal_1563  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  65.76 
 
 		 392 aa  507  9.999999999999999e-143  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.246626  n/a   
 
 
-
 
NC_011004  Rpal_4554  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  60.22 
 
 		 373 aa  466  9.999999999999999e-131  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0246  Methionine synthase vitamin-B12 independent  62.81 
 
 		 371 aa  464  9.999999999999999e-131  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.489924  n/a   
 
 
-
 
NC_007778  RPB_1584  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  59.46 
 
 		 372 aa  467  9.999999999999999e-131  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.278871  normal  1 
 
 
-
 
NC_009485  BBta_5702  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  57.03 
 
 		 372 aa  463  1e-129  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.442954 
 
 
-
 
NC_007958  RPD_1591  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  59.19 
 
 		 372 aa  464  1e-129  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.442624  normal  1 
 
 
-
 
NC_007925  RPC_4159  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  47.57 
 
 		 359 aa  355  6.999999999999999e-97  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_2698  methionine synthase, vitamin-B12 independent  45.16 
 
 		 373 aa  348  9e-95  Chelativorans sp. BNC1  Bacteria  normal  0.0426462  n/a   
 
 
-
 
NC_009513  Lreu_1081  methionine synthase, vitamin-B12 independent  49.06 
 
 		 379 aa  348  1e-94  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.351458  n/a   
 
 
-
 
NC_008148  Rxyl_1586  methionine synthase, vitamin-B12 independent  48.5 
 
 		 371 aa  347  2e-94  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_1559  Methionine synthase vitamin-B12 independent  46.54 
 
 		 369 aa  345  8.999999999999999e-94  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009513  Lreu_1870  methionine synthase, vitamin-B12 independent  48.12 
 
 		 378 aa  344  2e-93  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_36700  methionine synthase II (cobalamin-independent)  46.9 
 
 		 373 aa  340  2.9999999999999998e-92  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.829252  normal  0.784973 
 
 
-
 
NC_008530  LGAS_1661  hypothetical protein  45.9 
 
 		 366 aa  334  1e-90  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012880  Dd703_3283  Methionine synthase vitamin-B12 independent  44.85 
 
 		 394 aa  334  2e-90  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_008531  LEUM_1803  hypothetical protein  47.25 
 
 		 375 aa  330  3e-89  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_1745  Methionine synthase vitamin-B12 independent  45.48 
 
 		 373 aa  325  7e-88  Variovorax paradoxus S110  Bacteria  normal  0.963683  n/a   
 
 
-
 
NC_013757  Gobs_3379  Methionine synthase vitamin-B12 independent  46.92 
 
 		 376 aa  323  3e-87  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.101236  n/a   
 
 
-
 
NC_008528  OEOE_1718  hypothetical protein  44.05 
 
 		 378 aa  322  9.000000000000001e-87  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_3388  methionine synthase, vitamin-B12 independent  44.41 
 
 		 377 aa  321  9.999999999999999e-87  Polaromonas sp. JS666  Bacteria  normal  0.101975  normal  0.0229793 
 
 
-
 
NC_008527  LACR_0752  hypothetical protein  44.65 
 
 		 369 aa  317  1e-85  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.751192  n/a   
 
 
-
 
NC_008531  LEUM_1801  methionine synthase II (cobalamin-independent)  45.82 
 
 		 375 aa  317  2e-85  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_0268  Methionine synthase vitamin-B12 independent  42.78 
 
 		 375 aa  302  7.000000000000001e-81  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008528  OEOE_1190  methionine synthase II (cobalamin-independent)  38.71 
 
 		 385 aa  271  2e-71  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2926  Methionine synthase vitamin-B12 independent  38.9 
 
 		 367 aa  258  1e-67  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_3115  Methionine synthase vitamin-B12 independent  39.13 
 
 		 366 aa  253  3e-66  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
BN001303  ANIA_05019  Methionine synthase, vitamin-B12 independent, putative (AFU_orthologue; AFUA_3G12060)  34.01 
 
 		 438 aa  218  8.999999999999998e-56  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.807041 
 
 
-
 
NC_008148  Rxyl_0933  methionine synthase (B12-independent)  33.24 
 
 		 369 aa  200  3.9999999999999996e-50  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.254746  n/a   
 
 
-
 
NC_013171  Apre_1254  MetE protein  33.16 
 
 		 385 aa  186  4e-46  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_009954  Cmaq_0585  methionine synthase vitamin-B12 independent  26.15 
 
 		 388 aa  121  1.9999999999999998e-26  Caldivirga maquilingensis IC-167  Archaea  normal  0.246635  hitchhiker  0.00634375 
 
 
-
 
NC_010525  Tneu_0945  methionine synthase vitamin-B12 independent  27.02 
 
 		 384 aa  108  1e-22  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.8649  hitchhiker  0.000170069 
 
 
-
 
NC_009714  CHAB381_1170  5-methyltetrahydropteroyltriglutamate-- homocystei ne methyltransferase  25.63 
 
 		 388 aa  107  3e-22  Campylobacter hominis ATCC BAA-381  Bacteria  normal  1  n/a   
 
 
-
 
NC_008701  Pisl_0030  methionine synthase, vitamin-B12 independent  26.18 
 
 		 384 aa  107  3e-22  Pyrobaculum islandicum DSM 4184  Archaea  normal  1  normal  1 
 
 
-
 
NC_009073  Pcal_0648  methionine synthase (B12-independent)  26.17 
 
 		 384 aa  105  1e-21  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_009376  Pars_1072  methionine synthase, vitamin-B12 independent  26.32 
 
 		 384 aa  102  9e-21  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  1  normal  0.564481 
 
 
-
 
NC_009523  RoseRS_2516  methionine synthase, vitamin-B12 independent  25.77 
 
 		 340 aa  97.8  3e-19  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.57162 
 
 
-
 
NC_009767  Rcas_2758  methionine synthase vitamin-B12 independent  25.23 
 
 		 340 aa  93.6  4e-18  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.000302857  normal  1 
 
 
-
 
NC_012029  Hlac_2108  methionine synthase  24.26 
 
 		 356 aa  82  0.00000000000001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.112744  normal  0.0912449 
 
 
-
 
NC_013158  Huta_0080  methionine synthase  25.07 
 
 		 350 aa  81.6  0.00000000000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0497366  n/a   
 
 
-
 
NC_013922  Nmag_1089  Methionine synthase vitamin-B12 independent  25.75 
 
 		 366 aa  82  0.00000000000002  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013743  Htur_2396  Methionine synthase vitamin-B12 independent  26.03 
 
 		 358 aa  79.7  0.00000000000007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009954  Cmaq_0981  methionine synthase vitamin-B12 independent  24.93 
 
 		 393 aa  75.5  0.000000000001  Caldivirga maquilingensis IC-167  Archaea  normal  1  normal  1 
 
 
-
 
NC_013202  Hmuk_2667  methionine synthase  23.22 
 
 		 355 aa  75.5  0.000000000001  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_2409  methionine synthase, vitamin-B12 independent  24.53 
 
 		 377 aa  72  0.00000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
CP001800  Ssol_1385  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  23.81 
 
 		 332 aa  70.9  0.00000000003  Sulfolobus solfataricus 98/2  Archaea  normal  0.25974  n/a   
 
 
-
 
NC_011661  Dtur_1757  methionine synthase  23.1 
 
 		 342 aa  67  0.0000000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_009440  Msed_2248  methionine synthase  21.83 
 
 		 331 aa  63.5  0.000000005  Metallosphaera sedula DSM 5348  Archaea  normal  0.88722  normal  0.0178602 
 
 
-
 
NC_013131  Caci_4334  Methionine synthase vitamin-B12 independent  23.25 
 
 		 354 aa  62.8  0.00000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0520376  normal  0.182105 
 
 
-
 
NC_010815  Glov_3721  Methionine synthase vitamin-B12 independent  23.27 
 
 		 365 aa  59.7  0.00000008  Geobacter lovleyi SZ  Bacteria  normal  0.0129115  normal  0.3687 
 
 
-
 
NC_013730  Slin_5820  Methionine synthase vitamin-B12 independent  19.35 
 
 		 342 aa  59.7  0.00000008  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.392769 
 
 
-
 
NC_013739  Cwoe_4393  Methionine synthase vitamin-B12 independent  27.12 
 
 		 398 aa  57.8  0.0000003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_2808  Methionine synthase II (cobalamin-independent)- like protein  30.19 
 
 		 395 aa  57.4  0.0000004  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_2113  Methionine synthase vitamin-B12 independent  22.91 
 
 		 353 aa  55.8  0.000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.044306  normal  0.413093 
 
 
-
 
NC_013739  Cwoe_2812  Methionine synthase II (cobalamin-independent)- like protein  24.87 
 
 		 396 aa  55.5  0.000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0333252  normal  1 
 
 
-
 
NC_013169  Ksed_04810  methionine synthase II (cobalamin-independent)  24.94 
 
 		 404 aa  55.8  0.000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0581869  normal  1 
 
 
-
 
NC_009485  BBta_2188  methionine synthase (B12-independent)  23.4 
 
 		 344 aa  55.1  0.000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_13980  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  21.39 
 
 		 763 aa  52  0.00002  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2286  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  27.08 
 
 		 772 aa  50.4  0.00004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0758665  normal  1 
 
 
-
 
NC_007614  Nmul_A1493  hypothetical protein  21.11 
 
 		 333 aa  49.3  0.0001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.574311  n/a   
 
 
-
 
NC_008740  Maqu_0809  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  25.39 
 
 		 756 aa  49.3  0.0001  Marinobacter aquaeolei VT8  Bacteria  normal  0.134457  n/a   
 
 
-
 
NC_010623  Bphy_5470  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  39.68 
 
 		 763 aa  48.9  0.0002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0137341 
 
 
-
 
NC_013595  Sros_8776  MetE  22.1 
 
 		 367 aa  48.5  0.0002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_4646  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  25.13 
 
 		 764 aa  47.8  0.0003  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.910139 
 
 
-
 
NC_003296  RSp0676  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  21.32 
 
 		 776 aa  47.4  0.0004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0353438  normal  0.269425 
 
 
-
 
NC_013172  Bfae_12410  methionine synthase II (cobalamin-independent)  20.99 
 
 		 403 aa  47  0.0006  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.00635164  n/a   
 
 
-
 
NC_007777  Francci3_1991  methionine synthase, vitamin-B12 independent  25 
 
 		 390 aa  45.8  0.001  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_01036  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  21.39 
 
 		 346 aa  45.1  0.002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.370026  n/a   
 
 
-
 
NC_013947  Snas_5060  5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase  24.6 
 
 		 749 aa  44.7  0.002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.979212 
 
 
-
 
NC_010552  BamMC406_5175  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  24.62 
 
 		 764 aa  45.4  0.002  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.188369 
 
 
-
 
NC_010483  TRQ2_1533  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  19.58 
 
 		 734 aa  44.7  0.003  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B0362  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  24.1 
 
 		 764 aa  44.7  0.003  Burkholderia sp. 383  Bacteria  normal  0.997242  normal  0.880013 
 
 
-
 
NC_011004  Rpal_2650  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  24.06 
 
 		 788 aa  43.9  0.004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.521144  n/a   
 
 
-
 
NC_010515  Bcenmc03_4982  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  35.82 
 
 		 764 aa  43.5  0.006  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A1718  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  25.53 
 
 		 781 aa  43.1  0.007  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_3081  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  35.82 
 
 		 764 aa  43.1  0.009  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5286  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  35.82 
 
 		 764 aa  43.1  0.009  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>