| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1584 |
|---|
| Symbol | |
|---|
| ID | 3910055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1783538 |
|---|
| End bp | 1784656 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637883480 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase |
|---|
| Protein accession | YP_485205 |
|---|
| Protein GI | 86748709 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.278871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAA CCAAAGCCCC GTTCCGAGCC GACGAGGTCG GCAGCCTGTT GCGGCCGCAG
AGCATCAAGG AGGCGCGCGC CAGGCTGGAG AAGGGCGAAA TCTCCGCCGC CGATCTGAAG
AAGATCGAGG ACATGGAGAT CGAGAAGATC GTCCACAAGC AGTCGGCGAT CGGCCTCAAG
CTCGCCACTG ACGGCGAATT CCGCCGCTCC TGGTGGCACT TCGATTTCCT GGCCAAGCTG
ACCGGCTGCG AACTCTACCA TCCCGACACC GGCATCCAGT TCGCCGGCGT GCAGACCCGC
AATGATTCGA TCCGGGTGAT CGGCAAGCTC GACTTTCCCG ACGACCATCC GATGCTCGAG
CATTTCCGCT TCCTGAAGAA GCACGCCGAC GTCGCCCATG TCACCGCCAA GATGACGATC
CCGTCGCCGG CGGTGCTGCA TTTCCGCGGC GGCCGCAAGG CGATCTCCAA GGAGGTCTAT
CCCGATCTCG ACGGCTTCTT CGAGGATCTG GCCAAGACCT ACCGCAAGGC GGTGAAGGCG
TTCTACGACG CCGGCTGCCG CTATCTGCAG TTCGACGACA CCGTGTGGGC TTATCTGTGC
TCGCCGGACG AACTGGAGAA GGCCCGCGCC CGCGGCGACG ATCCGGACAA TCTGCAGCAG
ATCTACGCCC GTGTGATCAA CTACGCGATC GCCGAACGCC CGGCCGATAT GGTGATCACT
ACCCACGTCT GCCGCGGCAA TTTCCGCTCG ACCTGGATCT CCTCCGGCGG CTACGAGCCG
GTGGCCGAGA CGCTGCTCGC CGGCATCAAT TACGACGGCT ATTTCCTGGA ATACGATTCC
GAACGCGCCG GCGGCTTCGA GCCGCTGCGG TTTTTGCCGA AGGGCAACAA GGTCGTGGTG
GTCGGCGTCA TCACCTCGAA ATTCGGCGAG CTGGAAAACA AGGACGACAT CAAGCGTCGT
CTGGAGGAAG CCGCCAAATT CGCGCCGCTG GAGCAGCTCG CACTGTCGCC GCAATGCGGC
TTCGCCTCGA CCGAGGAAGG CAACATCCTC AGCGAGCAGG AGCAGTGGGA CAAGCTGCAG
CTTGCGGTCG AAGTGTCGCG CGAGGTCTGG GGCAAGTAG
|
|---|
| Protein sequence | MQRTKAPFRA DEVGSLLRPQ SIKEARARLE KGEISAADLK KIEDMEIEKI VHKQSAIGLK
LATDGEFRRS WWHFDFLAKL TGCELYHPDT GIQFAGVQTR NDSIRVIGKL DFPDDHPMLE
HFRFLKKHAD VAHVTAKMTI PSPAVLHFRG GRKAISKEVY PDLDGFFEDL AKTYRKAVKA
FYDAGCRYLQ FDDTVWAYLC SPDELEKARA RGDDPDNLQQ IYARVINYAI AERPADMVIT
THVCRGNFRS TWISSGGYEP VAETLLAGIN YDGYFLEYDS ERAGGFEPLR FLPKGNKVVV
VGVITSKFGE LENKDDIKRR LEEAAKFAPL EQLALSPQCG FASTEEGNIL SEQEQWDKLQ
LAVEVSREVW GK
|
|---|
| |