| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0648 |
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| Symbol | |
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| ID | 4908382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 611444 |
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| End bp | 612598 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124397 |
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| Product | methionine synthase (B12-independent) |
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| Protein accession | YP_001055540 |
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| Protein GI | 126459262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTGC CACGGGCGTT TATAACGTCG GTAGTGGGGT CGTGGCCGAG GCCCAGCTGG
CTAATCGAGG CGTTTGAAAA ATTTGAAAAG GGGCAGTTAG ACCAGCAGAC CTTCTCCCAG
TACCTAGACG ACGCCGTGAA GCTCGCCATT AGAGACCAGG AGGAGGCTGG GCTAGACGTG
ATAACCGACG GGGAGCAGAG GAGGACCTCC TTCGTAGCCT TTGTGGGACA GAAGCTCAGG
GGGTTTAAGA TCGTCCGCGT GGAGGAGCTA CATCCAAACG CAAAGGAGAT AATGAAGAAG
TACAAGGCGC CTCTCACCCT GTGGAGACCC GTGATCGCGG GGTACATAGA GGACAGCATC
ATAGCCGTGG ACGAGGTGGA GTACGCCAAG AAGGTCGCCA CGAGGCCTCT CAAGGTCACC
CTCCCGTCCC CCTACTTGAT AATGTGGGAG GCTTGGCACC ACAAGATCTC TGCGCCTTAC
TACCCGCGGC CCGAAGACGC CGCAGAGGCC TACGCCAAGG TGCTTCGGAG AGAGATCGCG
CGCCTCATCG ACAAAGGCGT GGCGTTTATA CAGCTGGACG AGCCAATGTT GGGGGACTTA
ATAGAGGCGG AGCCCGACAA GCCGGATAGG TACAAGCAAG TGGCCTCCGA GCTCTATGGA
CAGCGGTACA GAGGCCTCAG AGACGAGATC CAGCTCGCCG TTGACTTGGT AAACGAGGTG
GTGCAGGGCT ACGGCACGTC GGTGAGGCTG GGGATGCACC TCGACAGGTG GCCCACTGAG
GACTCCCCAG TGGTGGGCTA TGAGAGGCTG GCGCCGCAGA TCTTCGACAT TAAGGTGCGG
CAATACGTCG TTGAGTACAA GCACCCGAGG ATGGGCAACC CCGAGGAATT CGCCAAGATA
CTGCCAAGCG ACAAAGAGAT AGGTCTAGGC TCGATAGACG TGAGAGACCC CAAGAGAGTT
GAAACAGTGG AAGAGGTCGT GGCCCACGTG GAGAGAGTCG CGAAGTACGT AGACCCCACG
CGGATTTGGC TAAATCCGGA CTGTGGCTTC GCCCCAGGCA TGTACAGGGC CTTCCCAAGG
GCAGTGGCGC TGGAGAAGCT CAAAGTAATG GTAAAGGCCG CCAAGGCGCT GAGGGAAAAG
TACTGGTGGG TCTAG
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| Protein sequence | MSLPRAFITS VVGSWPRPSW LIEAFEKFEK GQLDQQTFSQ YLDDAVKLAI RDQEEAGLDV
ITDGEQRRTS FVAFVGQKLR GFKIVRVEEL HPNAKEIMKK YKAPLTLWRP VIAGYIEDSI
IAVDEVEYAK KVATRPLKVT LPSPYLIMWE AWHHKISAPY YPRPEDAAEA YAKVLRREIA
RLIDKGVAFI QLDEPMLGDL IEAEPDKPDR YKQVASELYG QRYRGLRDEI QLAVDLVNEV
VQGYGTSVRL GMHLDRWPTE DSPVVGYERL APQIFDIKVR QYVVEYKHPR MGNPEEFAKI
LPSDKEIGLG SIDVRDPKRV ETVEEVVAHV ERVAKYVDPT RIWLNPDCGF APGMYRAFPR
AVALEKLKVM VKAAKALREK YWWV
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