Gene Snas_5060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5060 
Symbol 
ID8886267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5371254 
End bp5373503 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content70% 
IMG OID 
Product5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 
Protein accessionYP_003513789 
Protein GI291302511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.979212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATC CACTGTCCAC AACCGTGCTG GGTTACCCCC GCATCGGACC GAATCGCGAG 
CTCAAACGCG CCGTCGAGAG TTACTGGGCG GGCAACTCCT CCGCCGAGGA ACTGTCGGCC
GCCGCGGCCG ACATCCGTTC GGGGATGCTG CGCGACCTGA CCGGCGCCGG ACTGGAGTCG
GTACCGTCCA ATGTCTTCTC GCTCTACGAC CACGTGCTGG ACGCCGCGGT GGCCGTCGAC
GCGATCCCGG GCCGCTACCG GGACCTGGGA CTGTCCGAGC TGGACACGTA CTTCGCGATG
GCGCGCGGCA ACGCCGACAT CGCGCCGCTG GAGCTGACCA AGTGGTTCGA CACCAACTAC
CACTACCTGG TCCCCGAGAT CGGGCCCGAG ACCCGGTTCC GGGCCGTGGC CGACAAACCG
CTGGCCGAGT TCCGCGAGGC CAAACAGCAG GGCGTACACA CCCGGCCGGT GCTGCTGGGG
CCGGTGACGC TGCTGCTGTT GTCGAAGTCC CCCGGCGGCG GCGCGCCGCT GGATCGACTG
ACCGACCTGG TGGAGGTGTA CGCCGAACTG TTGTCGCAAC TGGCTTCGGC GGGCGCCGAC
TGGGTGCAGC TCGACGAACC GGCCTTCGCC CTCGACCGCG ACTCAGCCGA ACTGTCGGCG
CTGCGCGACG CCTACCGTCA ACTCGGCGCC GTACCGGGCC GCCCGAAACT GCTGGTCACC
GGCGGCTACG GCGACTTCGG TGACGCGCTG CCGATCCTGC TGGACAGCCC GGTCGAGGCC
GTGGCGCTGG ACCTGGTGTC CGGCGAACGA GACCTGAACC GGCTGGCGGC GCACGGCGGT
TCCAACGGCA CCATGATCCT GGGCGGGCTC GTCGACGGCC GCAACATCTG GCGCACCGAC
CTGCGCACCG CTTCGGCGAC CCTGGGTACC CTGCTCGGCC TGGCCGACAC GGTGGGAGTG
TCCACATCGT CGTCACTGCT GCACGTCCCC GTCGACCTGA CCGCCGAGAC CACCATGGAC
CCGGCGCTGA AGGACCGGCT CGCCTTCGCC AAACAGAAAC TCGCCGAGGT GACCCGGCTG
GGCCGCTGCC TCAGCCACGG CGAGACCATC GGTGAGGCCG AGGCACTGCC GCCGGTCGCC
GACGCCTGGC GCGACGGCAC CGTCCGGGCC CGGCTGTCGG CACTGCGCCC CGACAGCGGC
ACCCGCACCC CCTATCGCCA GCGGGCCGCG GCCCAAGCCG AACGACTGGA ACTACCACCG
CTGCCCACCA CCACGATCGG CTCGTTCCCG CAGACCACCG ACGTGCGAGC CACCCGCGCC
GAGTACCGCA CCGGCAAGAT CGACCGGGCC GCCTACGTGT CGAGGATGCG CGCCGAGATC
GCCAGCGTGG TGCGGGCCCA GGAACGACTG GGCCTGGACG TCCTGGTGCA CGGCGAACCC
GAACGCAACG ACATGGTGCA GTACTTCGCC GAGTCGCTGC GCGGTTTCGC CGCCACCGCC
GCGGGCTGGG TGCAGTCCTA CGGTTCCCGC TGCGTGCGAC CACCGATCCT GTACGGCGAC
GTCAGCCGCC CCGACCCGAT CACGGTCGAG TGGTCGACGT ACGCGCAGTC GCTGACCGGC
AAGCCGGTCA AGGGCATGCT CACCGGACCG GTGACCATCC TGGCCTGGTC GTTCGTGCGC
ACCGACCAAC CACTGGCCGA CACGGCCCGC CAAGTCGCGC TGGCACTGCG CGACGAGGTG
CGTGACCTGG AGACCGCCGG GATCCGGGTG ATCCAGGTCG ACGAACCGGC ACTGCGAGAA
CTGTTGCCGC CCAGGCGAGG CGACCACGCG TCCTACCTGG AGTGGGCGGT CTCGGCGTTC
CGGCTGGCCA CCGGCGGCGT CGCCGACTCG ACCCAGGTCC ACACGCACCT GTGCTACTCG
GAGTTCGGCG AGGTCATCGA CGCGATCGCC GCACTGGACG CCGACGTCAC CAGCATCGAG
GCGTCCCGCT CCAAGATGGA GGTCCTGGAC GATCTACGCG AAGCCGGCTA CGAACGCGGC
GTCGGCCCGG GCGTGTACGA CATCCACTCG CCCCGGGTGC CCGGCACCGA CGAGATCGCC
GACTCGCTGC GCGCGGCACT GCGGGCCCTC CCGGCCGAAC GCCTGTGGGT CAACCCGGAC
TGCGGCCTCA AGACCCGGGG CTACCCAGAG GTCGAGGCGT CGCTGACCGC GATGGTCGAA
GCGGCCCGCC AGGTGCGGGG CGAACTATAG
 
Protein sequence
MNHPLSTTVL GYPRIGPNRE LKRAVESYWA GNSSAEELSA AAADIRSGML RDLTGAGLES 
VPSNVFSLYD HVLDAAVAVD AIPGRYRDLG LSELDTYFAM ARGNADIAPL ELTKWFDTNY
HYLVPEIGPE TRFRAVADKP LAEFREAKQQ GVHTRPVLLG PVTLLLLSKS PGGGAPLDRL
TDLVEVYAEL LSQLASAGAD WVQLDEPAFA LDRDSAELSA LRDAYRQLGA VPGRPKLLVT
GGYGDFGDAL PILLDSPVEA VALDLVSGER DLNRLAAHGG SNGTMILGGL VDGRNIWRTD
LRTASATLGT LLGLADTVGV STSSSLLHVP VDLTAETTMD PALKDRLAFA KQKLAEVTRL
GRCLSHGETI GEAEALPPVA DAWRDGTVRA RLSALRPDSG TRTPYRQRAA AQAERLELPP
LPTTTIGSFP QTTDVRATRA EYRTGKIDRA AYVSRMRAEI ASVVRAQERL GLDVLVHGEP
ERNDMVQYFA ESLRGFAATA AGWVQSYGSR CVRPPILYGD VSRPDPITVE WSTYAQSLTG
KPVKGMLTGP VTILAWSFVR TDQPLADTAR QVALALRDEV RDLETAGIRV IQVDEPALRE
LLPPRRGDHA SYLEWAVSAF RLATGGVADS TQVHTHLCYS EFGEVIDAIA ALDADVTSIE
ASRSKMEVLD DLREAGYERG VGPGVYDIHS PRVPGTDEIA DSLRAALRAL PAERLWVNPD
CGLKTRGYPE VEASLTAMVE AARQVRGEL