Gene Apre_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1254 
Symbol 
ID8398043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1345993 
End bp1347150 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content40% 
IMG OID644995599 
ProductMetE protein 
Protein accessionYP_003152999 
Protein GI257066743 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAA GATTTTTAAC TGTTGGATCA TTACTAAGAA ACGAAGAACT ACTAAAATAT 
AAGAGAGAAA TTGAAGGAAG AGAAGATATC ACCTATCCTT TCTACGACGA CCTAGAAGGT
TACAAAGAAT GCGAAGATAA GTCAGTTGCT GAGATTGTCG AAAAACAATT AGACCATGGT
CTCGTCCAAG TAACAGATGG TGAATATTCT AAGTCCCTAT GGCACCTTGA CTTCGTTTGG
GGTCTTGATG GATGCGAGAG ATTTATCAAC AAGACTGGTT ATTTCTTCAG AGAAAAAGAT
TCTGATGAGA AGTTCGAGAC AAGAAAAGAT ATTGGGATTA AAATCACCGG CAAGATTTCT
GGCAAAAACC ACGTCTTTAT CGAACATTTC AAAAGATTAA AGGACCTTGT CGATGGAAGA
GCTGAGGTTA AACAATGCAT CCCTTCCCCA TCTCATATCT ATGGTGACTT TGTAAATTCA
AATGTTATAG CTGATTCCAC ATACAAGGAT AATGATAGTT TTGAAGCTGA CCTTAAACAA
GCTTACAAGG ACTTCCTAGA CGACTTCAAA AAAGTCGGTG GAAAAATCAT CCAATTTGAT
GACTGTCTTT GGGAACAATT CGCTAAGGAA AACAAGGAAA ACCAATACGA TAACAACCAA
ACTGACCTTG ATAAGGACCT AGCCCTTGCC CAAAAATACA TCGACATCAA CAACGAACTA
ATCGATTACG GTCACGAGCT TGGCCTTACA GTCTACACCC ACAACTGTAG GGGTAACTAC
TCATCTAGAA ACTTCTCCGA TGGAACATAT GAATCAATCG CCGACCTATT TTTCAAAAAT
CTAAAATACG ATAGGTTCTA CCTAGAATGG GACGACGAAA GAGCAGGATC AGTTAAGGCA
CTCGAGGCCT TCAACAACAG AGACGACGTA GAAATTGTCC TAGGCTTCCT ATCAAGCAAG
ACCAACACCC TAGATGATGA AAAAAGAGCC TTCAACCTCT TAGAAGAGGC AAGTAAAATC
ATCGACAAGG ACAGACTCTA TCTCTCCCAC CAATGTGGTT TCGCTTCATG TGACTGTGGA
AACGAACTTA CAGAAGAAGA ACAATGGGCC AAAATAGACC AAGGTCACAG GATTGCAGAA
GAATTCTGGG GCGAATAA
 
Protein sequence
MSKRFLTVGS LLRNEELLKY KREIEGREDI TYPFYDDLEG YKECEDKSVA EIVEKQLDHG 
LVQVTDGEYS KSLWHLDFVW GLDGCERFIN KTGYFFREKD SDEKFETRKD IGIKITGKIS
GKNHVFIEHF KRLKDLVDGR AEVKQCIPSP SHIYGDFVNS NVIADSTYKD NDSFEADLKQ
AYKDFLDDFK KVGGKIIQFD DCLWEQFAKE NKENQYDNNQ TDLDKDLALA QKYIDINNEL
IDYGHELGLT VYTHNCRGNY SSRNFSDGTY ESIADLFFKN LKYDRFYLEW DDERAGSVKA
LEAFNNRDDV EIVLGFLSSK TNTLDDEKRA FNLLEEASKI IDKDRLYLSH QCGFASCDCG
NELTEEEQWA KIDQGHRIAE EFWGE