Gene Cmaq_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0981 
Symbol 
ID5710226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1031499 
End bp1032680 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content46% 
IMG OID641275482 
Productmethionine synthase vitamin-B12 independent 
Protein accessionYP_001540803 
Protein GI159041551 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTAA ATTACCTGAA CCACGCATTA CTAATGGTTG AGGAAGCCTT CGTAACCTCA 
GTGGTGGGTA GTTTCCCAAG GCCTAGGTGG CTTGTTGAGG CCTTTGAATT ATTTAATGAG
GGTAAGATGG ATAAGGAGGA GTATGAGGAG TACGTTAATG ACGCAGTCAA GTTAACAGTC
AAGGAGGAGG AGTTAGCTGG TGTGGAGGTT TTAACTGATG GTGAACAGAG GAGGACTAGC
TTCGTGGCCT TCGTGGGGCA GAAGATACCT GGCTTCAAGG TAATGCACAT ATCTGAAATA
AACCCACAGG GAATAGACAT TATGAGGCGT TATAAGGCTC AATTAACATA CTATAGGCCA
GTGGCAGTGG GTCCTATTGA GGATAAGCCG TTCACTGTGG ATGAGGCGTC CTTCACCCTA
AGCATAACCG ATAGGAGGGT TAAGGTAACT ATACCCAGCC CATACTTAAT AATGTGGGAG
GCTTGGCACA TTAAGTACTC TAAGGATTAT TATAAGGAAC CCGAGGAATT AGCTCAACAG
TACTCCAGGT TAGTTAGGAA TGAGGTAATT AGGTTGAGGG ATCTGGGTGT CCACTTCATT
CAATTAGATG AACCAATGCT TGGGGATTTA GTTGAAGCCT CCGAGAATGA ACCAGATAGG
TACAGGAAGG TGCTTCAGGA ATTAAATGGA CAGAAGTATA GGGGGTTTAA GAATGAGTTA
AGCCTAGCCA GGGATCTTAT CAATGAGACG ATTAAGGGTA TTGACGGCGT CAGGATTGGG
ATGCATATGG ATAGGTGGCC TAACCCAGAT TCACCATACT ATGGCGTGGG TTATGAGAAA
TTAGCCCCAG AGGTCGTTGA CATAAAGGTT AAGCAGTATG TGTTAGAGTA CGCAAGCCCA
GGGAGTGGGG ATCCAGCGAA ATTCGCTCAA TTACTGCCTC AGGAGAAGGA GATAGGACTG
GGTGTTGTTG AAGTTAGGGG TAATAGGGTT GAGGAACCTA GTGAAATAGT CGCCAGGGCT
GAGAGGGTTC TTAAGGTACT TGACCCAACC AGAGTATGGT TGAATCCCGA CTGTGGATTC
GGTGTTGGGA TGTTTAGGAG GTACAGTAGG AGGATTGCAT TCATGAAGCT TCGCTCAATG
GCTGAGGCGG CTAAAATCCT GAGAGGCAAG TACTTGAAGT AG
 
Protein sequence
MLLNYLNHAL LMVEEAFVTS VVGSFPRPRW LVEAFELFNE GKMDKEEYEE YVNDAVKLTV 
KEEELAGVEV LTDGEQRRTS FVAFVGQKIP GFKVMHISEI NPQGIDIMRR YKAQLTYYRP
VAVGPIEDKP FTVDEASFTL SITDRRVKVT IPSPYLIMWE AWHIKYSKDY YKEPEELAQQ
YSRLVRNEVI RLRDLGVHFI QLDEPMLGDL VEASENEPDR YRKVLQELNG QKYRGFKNEL
SLARDLINET IKGIDGVRIG MHMDRWPNPD SPYYGVGYEK LAPEVVDIKV KQYVLEYASP
GSGDPAKFAQ LLPQEKEIGL GVVEVRGNRV EEPSEIVARA ERVLKVLDPT RVWLNPDCGF
GVGMFRRYSR RIAFMKLRSM AEAAKILRGK YLK