| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0945 |
|---|
| Symbol | |
|---|
| ID | 6164498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 838138 |
|---|
| End bp | 839292 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641668101 |
|---|
| Product | methionine synthase vitamin-B12 independent |
|---|
| Protein accession | YP_001794327 |
|---|
| Protein GI | 171185408 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.8649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000170069 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTCC CGAGGACGTT TATAACATCG GTGGTGGGCT CCTGGCCCAG GCCCACCTGG
CTGATAGAGG CCTTCGAGAG GTTCGAGAAG GGCCAGATGG ACCAGCAGAC CTTCAACCAG
TACCTCGACG ACGCCGCCAA GCTGGCCATA AAGGACCAGG AGGAGGCGGG CCTAGACGTG
ATCACAGACG GGGAGCAGCG GAGGACCTCC TTCGTGGCCT TCGTCGGCCA GAAGATAAGG
GGGTTCAAGA TCGTGAGGGT GGAGGAGCTA CACCCCAACG CCAAGGAGAT AATGAAGAAG
TACAAGGCAC CCCTCACCCT CTGGAGGCCC GTCATCGCTG GCTACATAGA AGACAGCGTA
CTCGCCGTGG ACGAGGTGCA GTACGCCAAG AAGGTCACCC AGAAGCCTCT CAAGGTCACT
CTCCCCTCCC CCTACCTCAT AATGTGGGAG GCGTGGCACG CCAAGATCTC CGCCCCCTAC
TACCCCAGGC CGGAGGACGC CGCGGAGGCC TACGTCAAAG TGCTGAGGAA CGAGATAGCA
CGGCTTATAG ACGCCGGCGT GGCCTTCATA CAGCTGGACG AGCCCATGCT CGGCGACTTA
GTCGAGGCGG AGCAGAACAA GCCGGATAGG TACAAGCAGG TGGCCTCCGA GCTCTACGGC
CAGAGGTACA GAGGCCTAAA AGACGAGATA CAGCTGGCGG TCGACCTCGT CAACGAGACA
GTAAAGGGCT ACACCACCTC CGTGAGGATA GGCATGCACC TAGACCGCTG GCCCACCGAG
GAGTCCCCAA TAGTGGGCTA CGAACGCCTG GCCCCCCAGG TCTTCGACGT GAAGGTGAAG
CAGTACGTGG TCGAGTACAA ACACCCGAGG ATGGGCAACC CCGAGGAGTT CGCCAAGATA
CTCCCCTCGG ACAAGGAGAT AGGGCTGGGC TCCATCGACG TCCGGGACCC CAAGAGGGTG
GAGACCGTCG ACGAGGTGGT GGCCCACGTG GAGAAGGTGG CCAAATACGT CGACCCCACC
AGGATATGGC TAAACCCAGA CTGCGGCTTC GCCCCCGGCA TGTACCGCGC CTTCCCGCGC
GCCGTCGCCA TAGAAAAGCT AAAGGTGATG GTGAAAGCCG CCCAGATCCT ACGCCAGCGC
TACTGGTGGG CCTAA
|
|---|
| Protein sequence | MPLPRTFITS VVGSWPRPTW LIEAFERFEK GQMDQQTFNQ YLDDAAKLAI KDQEEAGLDV
ITDGEQRRTS FVAFVGQKIR GFKIVRVEEL HPNAKEIMKK YKAPLTLWRP VIAGYIEDSV
LAVDEVQYAK KVTQKPLKVT LPSPYLIMWE AWHAKISAPY YPRPEDAAEA YVKVLRNEIA
RLIDAGVAFI QLDEPMLGDL VEAEQNKPDR YKQVASELYG QRYRGLKDEI QLAVDLVNET
VKGYTTSVRI GMHLDRWPTE ESPIVGYERL APQVFDVKVK QYVVEYKHPR MGNPEEFAKI
LPSDKEIGLG SIDVRDPKRV ETVDEVVAHV EKVAKYVDPT RIWLNPDCGF APGMYRAFPR
AVAIEKLKVM VKAAQILRQR YWWA
|
|---|
| |