| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0676 |
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| Symbol | metE |
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| ID | 1222983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 860863 |
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| End bp | 863193 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637240536 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | NP_522237 |
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| Protein GI | 17548897 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0353438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.269425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA TCCATACCCT CGGCTATCCG CGCATCGGCG CGCAGCGTGA ACTCAAATTC
GCCCTGGAAT CCTTCTGGAA AGGCGCCTCG ACCGAGGCCG ACCTGCGCGA CACCGGCCGC
GCGCTGCGCG AGCGCCACTG GAACGCCCAG CGCGACGCCG GGCTCGACTT CGTCACCGTC
GGCGACTTCG CCTGGTACGA CCAGGTGCTG CAGACCGCCG CGCTGCTGGG CGCCCTGCCC
ACGCGCTACG GCTTCGACCC GGCGCAGCTG ACGCTGGCGC AATCCTTCGT GCTGGCCCGC
GGCAACGCCG ACCACGCGGC CATGGAAATG ACCAAGTGGT TCGACACCAA CTACCACTAC
CTCGTGCCCG AACTGACGCC GGACCTGCGC TTCGGCCCCG GCACCGGCTG GCTGTTCGAC
GAGGTGCGCG AAGCGCAGGC CGCCGGGCAC CGCGTGAAGG TGGCGCTGCT CGGCCCCGTC
ACGTTCCTGC ATCTGGCCAA GGCGCGCGGC GGGCTGGCCG ACAAGCTGTC GCTGCTGCCG
CAACTGCTGC CGGCCTACGC CGCGGTGCTC AAGCGCCTGG CGGCCGAGGG CGTCGAATGG
GTGCAGATCG ACGAGCCCGC ACTGGTGCTG GATCTGCCGC AAGCCTGGTC GGATGCTTAC
GGCCCGGCCT ACGCGACGCT GGCGGCGGCC GGCGGCCCCA GGCTGCTGCT CGCCACGTAT
TTCGAAGCCG CCTCGCACCA CGCGGCGCTG ATCCGATCGC TGCCGGTGGC CGGCGTGCAC
CTGGATCTGG TGCGCGCGCC GCAGCAACTC GAAGCGTTCG CGCCGTGGCC GGCCGACAAG
GTCCTGTCCG CCGGCGTGGT CGACGGCCGC AACATCTGGC GCACGGACCT GGAGCAAGCG
CTGGCGCGCG TGGCGCCGCT GGCGCAAACC CTGGGCGAAC GCCTGTGGCT GGCGCCGAGC
TGCTCGCTGC TGCACGTTCC GGTGGACCTG GCCGCCGAGA CCCGGCTGGA CGATGAGCTC
AAGGGCTGGC TGGCCTTCGC GCGCCAGAAG CTGGACGAGC TCGCCGTCCT CAAGCGTGCC
GTGATCGATG GCCGCGACGC TGCGCACGCC GCCCTGGCCG GCAGCGCCGC CGCCATCGCC
TCCCGCGCCG CCTCGCGCCG CGTGCACAAC GACAGCGTCA AGAAGCGCGC CGCCGCCATC
CGCGCGCAGG ACGCCGAGCG CGCCGCGCCC TACCCCGTGC GCGCCGCGGC GCAGCAGGCC
CGCCTGAACC TGCCGCTGCT GCCGACCACC ACCATCGGCT CGTTCCCGCA GACGGCGGAA
ATCCGCCAGG CGCGCGCGCA ATACAAGCGC GGCGAGCTGC AGGCGCTGAC CTACCTGGAA
CGCATGCGCG CCGAGATCGC CGACGTGGTG CAGCGCCAGG AAGCCCTGGG CCTGGACATG
CTCGTGCACG GCGAAGCCGA GCGCAACGAC ATGGTCGAAT ACTTCGGCGA GCTGCTGTGG
GGCTACGCCT TCACCGCCAA CGGCTGGGTG CAGAGCTACG GTTCGCGCTG CGTGAAGCCG
CCGGTCATCT ACGGCGACGT GTACCGCCCC GAGCCGATGA CGGTGGAGTG GTCCAGGTAC
GCGCAGAGCC TGACGGCCAA GCCGATGAAA GGCATGCTGA CCGGCCCGGT GACGATGCTG
CAATGGTCCT TCGTGCGCGA CGACCAGCCG CGCGAGCAGA CCGCGCTGCA GATCGCCCTG
GCGCTGCGCG ACGAAGTGCG CGACCTGGAA GCCGCCGGCA TCGCCGCCAT CCAGATCGAT
GAGCCGGCCT TCCGCGAGGG CCTGCCGCTG CGCGCGGGCG ATGTCGCCGT CTACCTGGAG
TGGGCCGCGC GCGTCTTCCG CGTGTCGGCC TCGGGCGTGC GCAACGACAC GCAGATCCAC
ACGCACATGT GCTATTCGGA GTTCAACGAC ATCCTGCCGG CCATCGCGTC GATGGATGCC
GACGTGATCA CCATCGAGAC CTCGCGCTCG AACATGGAGC TGCTGGACGC CTTTGGCGAA
TTCGCCTACC CGAACGAGAT CGGCCCGGGG GTCTACGACA TCCACTCGCC GCGCGTGCCG
CGCGTGGAAG AAATGGAAGC CCTGCTGGAC AAGGCCGCGC AGGTGGTGCC GGTGCAGCGC
CTGTGGGTCA ACCCCGACTG CGGCCTGAAG ACGCGCGGCT GGCCGGAAGT CGAGGCCGCG
CTGCGGGGCA TGGTGGAAGC GACGCGGCGC CTGCGCGCCA GGCATGCCGG CGCGGTGCAT
GCCGGCACCC CGGCCACGCG GGCGGAACAC GCGGAAAGCG CGCTCGCCTG A
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| Protein sequence | MTTIHTLGYP RIGAQRELKF ALESFWKGAS TEADLRDTGR ALRERHWNAQ RDAGLDFVTV
GDFAWYDQVL QTAALLGALP TRYGFDPAQL TLAQSFVLAR GNADHAAMEM TKWFDTNYHY
LVPELTPDLR FGPGTGWLFD EVREAQAAGH RVKVALLGPV TFLHLAKARG GLADKLSLLP
QLLPAYAAVL KRLAAEGVEW VQIDEPALVL DLPQAWSDAY GPAYATLAAA GGPRLLLATY
FEAASHHAAL IRSLPVAGVH LDLVRAPQQL EAFAPWPADK VLSAGVVDGR NIWRTDLEQA
LARVAPLAQT LGERLWLAPS CSLLHVPVDL AAETRLDDEL KGWLAFARQK LDELAVLKRA
VIDGRDAAHA ALAGSAAAIA SRAASRRVHN DSVKKRAAAI RAQDAERAAP YPVRAAAQQA
RLNLPLLPTT TIGSFPQTAE IRQARAQYKR GELQALTYLE RMRAEIADVV QRQEALGLDM
LVHGEAERND MVEYFGELLW GYAFTANGWV QSYGSRCVKP PVIYGDVYRP EPMTVEWSRY
AQSLTAKPMK GMLTGPVTML QWSFVRDDQP REQTALQIAL ALRDEVRDLE AAGIAAIQID
EPAFREGLPL RAGDVAVYLE WAARVFRVSA SGVRNDTQIH THMCYSEFND ILPAIASMDA
DVITIETSRS NMELLDAFGE FAYPNEIGPG VYDIHSPRVP RVEEMEALLD KAAQVVPVQR
LWVNPDCGLK TRGWPEVEAA LRGMVEATRR LRARHAGAVH AGTPATRAEH AESALA
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