| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3103 |
|---|
| Symbol | |
|---|
| ID | 8117801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3536602 |
|---|
| End bp | 3537708 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644853480 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase |
|---|
| Protein accession | YP_003005404 |
|---|
| Protein GI | 251790683 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAG CCCTTTCTCC GTTTCGTGCC GATGTGGTCG GCAGTTTGTT GCGTCCGGCG
GCTATCAAGC AGGCACGTTT GCAGTTTCAG GCCGGTGAGA TTGACGCCAC TGCGTTGCGC
CATGTCGAAG ATCAGGAAAT TCAACGCGCG GTGGAGTTGC AGCGCGCTGC GGGTCTGCAA
CTGGTGACCG ACGGCGAGTT TCGCCGCGCC TGGTGGCACT TTGACTTCTT CGACAGCCTG
AACGGCGTGG AGCGTTATGA AGCGGATCAG GGGATTCAGT TTAACGGCGT GCAGACCAAA
GCCCGCGGTG TGAAAGTGAC CGGCAAAGTC AGTTTTAATC CCCAGCACCC GATGCTGGAC
GATTTCCGCT TCCTCAACAG CGTGGCCGGC GATGCGGTCG CCAAGATGAC GATTCCCAGC
CCGAGTGTGT TGCATTTCCG CGGCGGCCGT AACGTCATCG ACAGTACCGT TTATCCGGAT
CTGGCCGACT ATTTCGACGA TCTGGCGTTG ACCTGGCGTG ATGCCATTCG CGCATTCTAT
GACGCCGGCT GCCGTTACCT GCAACTGGAC GATACGGTGT GGGCTTATCT GTGTTCCGAA
GACCAGAAAC GCCAGATCCG CGAACGCGGC GATGATCCGG ATTATCTGCG CCGCACCTAT
GCGCAAGTGC TGAACAAGGC GCTGGAGGGT AAACCGGCCG ATCTGGTGGT GGGCCTGCAT
GTCTGCCGCG GTAACTTTCG CTCCACCTGG ATTTCCGAAG GCGGCTATGA GCCGGTGGCG
GAAACGCTGT TTGGTGAAGT GAATGTGGAT GCATTTTTCC TCGAATACGA CACTGAGCGG
GCCGGTGGCT TTGAGCCGTT GCGTTTCATC AAACCGGGCC ACCAGAAAGT GGTGCTGGGT
TTGATCACCA CCAAAAATGG CGAACTGGAA AACGCGGAAG AAGTACAAAA GCGTATTGCC
GAGGCCACGC AATATATTGC GCTGGACCAG TTGTGCCTGA GCCCGCAATG TGGTTTTGCG
TCTACCGAAG AGGGCAACAC GCTGTCGGAA GAGCAGCAGT GGGCAAAACT CAAGCTGGTG
GTGGATATCG CTAACCGCGT CTGGTAA
|
|---|
| Protein sequence | MTQALSPFRA DVVGSLLRPA AIKQARLQFQ AGEIDATALR HVEDQEIQRA VELQRAAGLQ
LVTDGEFRRA WWHFDFFDSL NGVERYEADQ GIQFNGVQTK ARGVKVTGKV SFNPQHPMLD
DFRFLNSVAG DAVAKMTIPS PSVLHFRGGR NVIDSTVYPD LADYFDDLAL TWRDAIRAFY
DAGCRYLQLD DTVWAYLCSE DQKRQIRERG DDPDYLRRTY AQVLNKALEG KPADLVVGLH
VCRGNFRSTW ISEGGYEPVA ETLFGEVNVD AFFLEYDTER AGGFEPLRFI KPGHQKVVLG
LITTKNGELE NAEEVQKRIA EATQYIALDQ LCLSPQCGFA STEEGNTLSE EQQWAKLKLV
VDIANRVW
|
|---|
| |