| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1745 |
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| Symbol | |
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| ID | 7974487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1879268 |
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| End bp | 1880389 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792344 |
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| Product | Methionine synthase vitamin-B12 independent |
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| Protein accession | YP_002943661 |
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| Protein GI | 239814751 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.963683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAGC ACGCCGCCCT GCCCGCCCGC TACGACCACG TCGGCAGTTT CCTGCGCCCC
AAATACCTGC TCGAAGCACG CGAGCAAAAG GCCAAGGGCG AGATCACGCC CGAGCAGCTG
CGCAAGGTCG AAGACAAGGC CATCACCGAG ATCGTCCGGT TCCAGGAAGA CATTGGCCTC
AAGAGCATCA CCGACGGCGA ATTCCGCCGC ACCTACTTCC ACATCGATTT CCTCGACCAG
CTCGGCGGCG TGAAGACCGA CATTCCAGTC ACCATCCGCA AGCCCGACGG CACCGAGGAA
CTCGCGCCGC CCGCGATGCG CGTGCTCGAC AAGGTGCGCC ACATCAAGGA CATCCAGCTC
GCCGACTTCC AGTACCTCAA GAGCCAGGTC TCGGCCGGCC GCACGCCCAA GGTGACGATT
CCTTCGCCGA CGATGCTGCA CTTCCGCGGC GGCCGCGCCG GCATCAGCAA GGAGGCCTAC
CCCGAGCTCG ACCCGGTGTT CTACGACGAC GTCGCCAAGG CCTACGGCGA CGAACTGCGC
TCGCTCGCGG CCGCAGGCTG CACCTACGTG CAGATGGACG ACACCAACCT GGCCTACCTG
TGCGACGAGC ACATGCGCGA AGCCGCCCGC AAGCGCGGCG ACGATCCCAA CGAGCTGCCG
CACCGCTACG CCGCCTTCAT CAACAAGGTG GTGGCACAGA AGCCGCCGGG CATGCTGCTG
GCCATGCACC TGTGCCGCGG CAACTTCAAG AGCACCCACG CCGCGGCCGG CAACTACGAG
CCGGTGGCCG AGGCGCTGCT GAAGGAAATG GACCTCGACG CCTACTTCAT GGAATACGAC
GACGCGCGCT CGGGCGACTT CAAGCCGCTG CGCTACCTGC CCAAGGGCAA GACGGTGGTG
CTGGGCCTCG TGACCACCAA GTTCGGCGAG ATGGAAGACA AGGACGAGCT CAAGCGCCGC
ATCGAGGATG CCGCCAAGTA CGCGCCGCTC GAGCAGCTCG CGCTGTCGCC GCAGTGCGGC
TTCTCGAGCA CGGTGCACGG CAACAACATC GCGGTGGAAG CGCAGCGCGC CAAGCTGCGC
CTCGTGGTCG AGACCGCGCA GGAGGTCTGG GGCTCGACCT GA
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| Protein sequence | MSQHAALPAR YDHVGSFLRP KYLLEAREQK AKGEITPEQL RKVEDKAITE IVRFQEDIGL
KSITDGEFRR TYFHIDFLDQ LGGVKTDIPV TIRKPDGTEE LAPPAMRVLD KVRHIKDIQL
ADFQYLKSQV SAGRTPKVTI PSPTMLHFRG GRAGISKEAY PELDPVFYDD VAKAYGDELR
SLAAAGCTYV QMDDTNLAYL CDEHMREAAR KRGDDPNELP HRYAAFINKV VAQKPPGMLL
AMHLCRGNFK STHAAAGNYE PVAEALLKEM DLDAYFMEYD DARSGDFKPL RYLPKGKTVV
LGLVTTKFGE MEDKDELKRR IEDAAKYAPL EQLALSPQCG FSSTVHGNNI AVEAQRAKLR
LVVETAQEVW GST
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