Gene Lreu_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1870 
Symbol 
ID5188956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1931197 
End bp1932333 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content41% 
IMG OID640591713 
Productmethionine synthase, vitamin-B12 independent 
Protein accessionYP_001272444 
Protein GI148545074 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT TCACTACACG TACTACATCA CCATTTCGTT ATGACATCGT TGGAAGCTTC 
CTTCGTCCTC AAGAGCTAAA AGAAGCTCGC GCAAAATTTG CAAACGGCGA AATAACACAA
GCAGACTTAA CAGCTGTTGA AGATAAAGCA ATCATTAATT TGATTAAACA AGAAGAAGCT
GCTGGCCTAA AAGCAGTTAC TGACGGTGAA TTCCGGCGTA GTTGGTGGCA CCTTGACTTC
TTCTGGGGAT TAAATGGCGT TAAAAAAGCT ACTCTAAAGG AAGGCTATAA GTTTGCAGAT
GAAGAGACTC GTCCTGAAAC TGCTCAAATT ACGGGAAAAA TCTCCGGCGA AAACCACCCC
TTTGTCGAAC ATTTCAAATT TACCCAAGCT CATACCTCTG ATGGCGTTCA AGTTAAACAA
ACCATTCCTG CGCCAGCACA ATTTTTAGAA GAATTTCTTC GTCCCGAAAA TCAAGCTAAT
GCTAAAGAAT TTTATCCCAA CCAAGAAGAT TTAGATCATG ACGTTGCAAC TGCTTATCAT
CAAGTAATTG AAGATCTTTA TGCTGCTGGT TGTCGTACTC TCCAACTAGA TGACTGTACA
TGGGGAATTT CTGTTAACGC CTTTGCTAAC CTAAAGAAAA AAGACCCCAA TGCTGATGTA
TCTCAGCTTG AAGCCCTTCA AAAGCGATTC TTAAAAGTAA ACAATGATGC AATCGCTAAT
TTACCTGCCG ACTTAACAAT TAATACCCAC GTTTGCCGCG GAAACTATCA CTCAACATGG
GCGGCTGCCG GTGGATATGG ACCAGTTGCC GACACGCTAT TTGCTAAGGA AAACGTCACT
GCCTTCTATC TCGAATACGA TAGTGAACGT GCTGGCGGAT TTGAACCACT TAGCAAAGTT
CCTGATGATA AGTATGTTGT TCTTGGTTTA ATTACTTCAA AATCAGGTGA ACTTGAAGAT
AAGGAAGCAA TTATCAAACG AATTCATGAA GCCGCACAAT TCCATCCATT AGATAAGCTC
TGTCTTAGTC CTCAATGTGG CTTTGCATCA ACTGAAGAAG GAAATATTTT AACAGAAGAA
CAACAATGGA AGAAGGTTGC ACTTGTTAAA GAAATTGCTA CAGAAGTTTG GGGATAA
 
Protein sequence
MTEFTTRTTS PFRYDIVGSF LRPQELKEAR AKFANGEITQ ADLTAVEDKA IINLIKQEEA 
AGLKAVTDGE FRRSWWHLDF FWGLNGVKKA TLKEGYKFAD EETRPETAQI TGKISGENHP
FVEHFKFTQA HTSDGVQVKQ TIPAPAQFLE EFLRPENQAN AKEFYPNQED LDHDVATAYH
QVIEDLYAAG CRTLQLDDCT WGISVNAFAN LKKKDPNADV SQLEALQKRF LKVNNDAIAN
LPADLTINTH VCRGNYHSTW AAAGGYGPVA DTLFAKENVT AFYLEYDSER AGGFEPLSKV
PDDKYVVLGL ITSKSGELED KEAIIKRIHE AAQFHPLDKL CLSPQCGFAS TEEGNILTEE
QQWKKVALVK EIATEVWG