| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2248 |
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| Symbol | |
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| ID | 5104309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2149687 |
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| End bp | 2150682 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640508141 |
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| Product | methionine synthase |
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| Protein accession | YP_001192310 |
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| Protein GI | 146304994 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.88722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0178602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTC CACCTCTTCC AACAACAGTT ATAGGTAGCT ATCCTAGGCC CAAATGGTTA
AGGGAAGCCA TAACCTTGGC AAAGAACGGA AGGCTATCGC GAGAGGATCT ACAGGAAGCG
TTTAACGACG CAGCTATTAC CGTCATGAGA GATCACCAAG TTGCTGGGAT TGATGTTCCC
ACAGATGGAG AAGTAAAAAG GGATGAGATG GTAGAATTCT TCGCAGAAAG ACTGAAGGGT
TTTAGATTTT ATGGACCTGT GAGGGTATGG GGAACGGCCT ATTATAGGAA ACCCTCAGTA
GTGTCGAAGA TAGAGTATAA TAGACCAATG CTTGTAGACG AAGTTGAATT TACTAAGAGT
ATAACTTACA CTCCTTACTT CAAGGTGACA ATTACTGGTC CATACACCAT GGCCTACTGG
TCCTACAATG AATATTATAA GGACAGGAGG GAGATGGCCT TCGATCTTGC CAAGGCGATA
AACGCTGAAA TAAGGAACCT AGTTGAGGCT GGAGCACCCG TGATTCAGGT AGATGAACCT
GCTATACACT CTAGCGCTGA GGAGGTTGAA TGGGCAGTTG AAGCTGTAAA CGAATCAGTG
AAGGGAATTA ATGCGAAACT CATGTTGCAT ATATGCTACG GTGATTATAA AATAGTCGCA
CCATATCTAA ATGACTTCAA GGTAGATCAA ATAAATTTCG CATTAAAGAT ATATAACTAT
AAGCCTCTCA AATTGTTTAA GGAACACGGG TATGAAAAAG AAATAGGTGC GGGCGTTATA
GACGTTCATA GCAGAAACGT AGAATCCCCA GAGGAAGTCT ATAAGGATAT CAAGAGACTT
ATGGAGTACT TCCCGCTAGA AAAGATATGG ATAAATCCAG ATTGTGGGTT AAAGTTACTT
CCAAGAAATA TAGCCTTCTC TAAGATGGTG TCAATGGTGA AAGGAGTTCA GATGGTTAGG
GAAGAACTTA AAAAGAGCGG TATAGTAGGA AAATAA
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| Protein sequence | MNLPPLPTTV IGSYPRPKWL REAITLAKNG RLSREDLQEA FNDAAITVMR DHQVAGIDVP
TDGEVKRDEM VEFFAERLKG FRFYGPVRVW GTAYYRKPSV VSKIEYNRPM LVDEVEFTKS
ITYTPYFKVT ITGPYTMAYW SYNEYYKDRR EMAFDLAKAI NAEIRNLVEA GAPVIQVDEP
AIHSSAEEVE WAVEAVNESV KGINAKLMLH ICYGDYKIVA PYLNDFKVDQ INFALKIYNY
KPLKLFKEHG YEKEIGAGVI DVHSRNVESP EEVYKDIKRL MEYFPLEKIW INPDCGLKLL
PRNIAFSKMV SMVKGVQMVR EELKKSGIVG K
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