Gene Saro_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2409 
Symbol 
ID3916728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2576621 
End bp2577754 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID640445164 
Productmethionine synthase, vitamin-B12 independent 
Protein accessionYP_497679 
Protein GI87200422 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA TCAAGACCAC TCATGTCGGA AGCCTGCCGC GCGGCGACGA ACTGACGCCG 
TTGCTCCTGG CCCGCGACAA GGGCGAACCC TATGACGCCG CCGAGTTCGA CCGCGTCGTT
TCCGCCGCCG TCGACCAAGC GGTGAAGGAC CAGGTTGCAG CGGGGGTCTC GGTCGTGTCC
GATGGCGAAC TCGGCAAGGT CGGTTACTCG ACCTACATGA TCGAGCGCCT GTCCGGCTTC
GGCGGCCACA TCGATCGCAA GCCCGCGGCC GACCTCGCCG AAGTGCCGAA CCTGGCGAAG
AAGCTGTCGG CGATCATGGG CAGCCAGGAA TTCGTCCGCG CCTCGTGCAT CGGGCCGGTG
CGCAAGGTCA CCCTCCAGCC GCTGCACGAC GATATCCGCC GCTTCAAGGC CGCGCTGGCG
AACCACGCCG CGCCCGATAC CGAGGCGTTC ATGAACGCGG CGTCGCCGGG TCTCATCACC
GCCTTCCAGG TCAACCGCCA CTACCCGAGC CACGAGGCCT ACCTCGCAGA CCTCGCCGAT
GCGATGCGCG AGGAGTACGA GACGATCGTG AACGAGGGCT TCTACCTCCA GCTCGATTGC
CCCGACCTCG CGATGAGCCG CCACACCGGC TATCAGGACC TCTCGGAAGA GGATTTCCTC
AAGGTCGCGG CCGCCAACGT CGAGGCGCTG AACGCCGCCA CCGCGAACAT CCCGCCGGAA
CGGATGCGGA TGCACATCTG CTGGGGCAAC TACGAAGGCC CGCACGACCA CGACATCCCG
CTCGAGCGCG TCGTCGACAT CATCATCAAG GCGCGGCCGG CGACGATCCT GTTCGAAGCC
GCCAATCCGC GCCACGAGCA CGAATGGAAG GTGTGGAAGG ACGCGAAGCT GCCCGACCAC
AAGATCCTCG CTCCGGGCCT GATCGACACC TGCTCCAACT ACATCGAGCA TCCCGAACTG
ATCGCCCAGC GCATCGAGCG CTTCGCCAAT TTCGTCGGCG CGGACCGCGT CGTTGCCAGC
ACCGACTGCG GCTTCGGCAC CTTCGCGGGC TATGGCAAGC TCGATCCCAT CGTCACGTGG
CGCAAGCTCC GGTCGCTGCG GGAAGGCGCG GATATCGCCG CGAGCCGCCT GTGA
 
Protein sequence
MAKIKTTHVG SLPRGDELTP LLLARDKGEP YDAAEFDRVV SAAVDQAVKD QVAAGVSVVS 
DGELGKVGYS TYMIERLSGF GGHIDRKPAA DLAEVPNLAK KLSAIMGSQE FVRASCIGPV
RKVTLQPLHD DIRRFKAALA NHAAPDTEAF MNAASPGLIT AFQVNRHYPS HEAYLADLAD
AMREEYETIV NEGFYLQLDC PDLAMSRHTG YQDLSEEDFL KVAAANVEAL NAATANIPPE
RMRMHICWGN YEGPHDHDIP LERVVDIIIK ARPATILFEA ANPRHEHEWK VWKDAKLPDH
KILAPGLIDT CSNYIEHPEL IAQRIERFAN FVGADRVVAS TDCGFGTFAG YGKLDPIVTW
RKLRSLREGA DIAASRL