25 homologs were found in PanDaTox collection
for query gene Cphamn1_0571 on replicon NC_010831
Organism: Chlorobium phaeobacteroides BS1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010831  Cphamn1_0571  transcriptional regulator, XRE family  100 
 
 		 94 aa  190  7e-48  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  0.263203 
 
 
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NC_011060  Ppha_0986  transcriptional regulator, XRE family  59.78 
 
 		 130 aa  122  1e-27  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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NC_007484  Noc_2542  XRE family transcriptional regulator  52.22 
 
 		 165 aa  95.5  2e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
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NC_007498  Pcar_1786  helix-turn-helix transcriptional regulator  43.62 
 
 		 124 aa  84  7e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
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NC_011989  Avi_1998  hypothetical protein  41.49 
 
 		 119 aa  73.6  0.000000000001  Agrobacterium vitis S4  Bacteria  normal  0.503515  n/a   
 
 
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NC_008740  Maqu_2666  XRE family transcriptional regulator  51.19 
 
 		 86 aa  71.6  0.000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.355164  n/a   
 
 
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NC_009667  Oant_0893  XRE family transcriptional regulator  41.25 
 
 		 110 aa  70.5  0.000000000007  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00171565  n/a   
 
 
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NC_009049  Rsph17029_2268  XRE family transcriptional regulator  40.26 
 
 		 201 aa  69.7  0.00000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.924655  normal  0.398688 
 
 
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NC_011894  Mnod_5702  transcriptional regulator, XRE family  38.3 
 
 		 124 aa  66.6  0.0000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_009719  Plav_0868  XRE family transcriptional regulator  35.16 
 
 		 263 aa  61.2  0.000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.471001  normal  1 
 
 
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NC_007434  BURPS1710b_1676  gp68  40.22 
 
 		 155 aa  60.5  0.000000009  Burkholderia pseudomallei 1710b  Bacteria  normal  0.610076  n/a   
 
 
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NC_010725  Mpop_4742  transcriptional regulator, XRE family  34.04 
 
 		 124 aa  58.9  0.00000002  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0122495 
 
 
-
 
NC_012850  Rleg_0273  transcriptional regulator, XRE family  49.21 
 
 		 115 aa  57  0.00000008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_2413  helix-turn-helix domain-containing protein  35.79 
 
 		 129 aa  54.3  0.0000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.383209  normal  1 
 
 
-
 
NC_010465  YPK_1221  XRE family transcriptional regulator  34.88 
 
 		 119 aa  49.7  0.00001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0604  transcriptional regulator, XRE family  29.63 
 
 		 138 aa  48.9  0.00003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_3170  putative phage-related transcriptional regulator  32.91 
 
 		 129 aa  47.8  0.00005  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0151351  normal  0.529674 
 
 
-
 
NC_010172  Mext_2943  putative phage-related transcriptional regulator  31.65 
 
 		 129 aa  46.6  0.0001  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.118261 
 
 
-
 
NC_013421  Pecwa_0405  transcriptional regulator, XRE family  34.48 
 
 		 123 aa  45.8  0.0002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.267838  n/a   
 
 
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NC_011666  Msil_1040  transcriptional regulator, XRE family  34.74 
 
 		 137 aa  44.3  0.0006  Methylocella silvestris BL2  Bacteria  n/a    normal  0.119087 
 
 
-
 
NC_003295  RSc3278  hypothetical protein  31.71 
 
 		 110 aa  44.3  0.0006  Ralstonia solanacearum GMI1000  Bacteria  normal  0.397996  normal  1 
 
 
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NC_007925  RPC_3072  XRE family transcriptional regulator  43.64 
 
 		 135 aa  43.9  0.0008  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.185071  normal  0.0716873 
 
 
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NC_011769  DvMF_1635  transcriptional regulator, XRE family  28.92 
 
 		 112 aa  40.4  0.007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
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NC_009636  Smed_0556  XRE family transcriptional regulator  51.52 
 
 		 62 aa  40.8  0.007  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.4035 
 
 
-
 
NC_002967  TDE1647  DNA-binding protein  27.71 
 
 		 115 aa  40.4  0.007  Treponema denticola ATCC 35405  Bacteria  normal  0.68181  n/a   
 
 
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