16 homologs were found in PanDaTox collection
for query gene Mchl_3170 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011757  Mchl_3170  putative phage-related transcriptional regulator  100 
 
 		 129 aa  243  9e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0151351  normal  0.529674 
 
 
-
 
NC_010172  Mext_2943  putative phage-related transcriptional regulator  97.67 
 
 		 129 aa  238  2e-62  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.118261 
 
 
-
 
NC_010725  Mpop_4742  transcriptional regulator, XRE family  37.93 
 
 		 124 aa  69.3  0.00000000002  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0122495 
 
 
-
 
NC_010581  Bind_1681  XRE family transcriptional regulator  43.48 
 
 		 123 aa  68.2  0.00000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.527285 
 
 
-
 
NC_011894  Mnod_5702  transcriptional regulator, XRE family  36.52 
 
 		 124 aa  67.8  0.00000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6629  putative Phage-related transcriptional regulator  36.29 
 
 		 143 aa  67  0.00000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.275503 
 
 
-
 
NC_011989  Avi_1998  hypothetical protein  33.33 
 
 		 119 aa  61.6  0.000000003  Agrobacterium vitis S4  Bacteria  normal  0.503515  n/a   
 
 
-
 
NC_009049  Rsph17029_2268  XRE family transcriptional regulator  36.7 
 
 		 201 aa  60.5  0.000000007  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.924655  normal  0.398688 
 
 
-
 
NC_009667  Oant_0893  XRE family transcriptional regulator  29.09 
 
 		 110 aa  52.4  0.000002  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00171565  n/a   
 
 
-
 
NC_010511  M446_6702  putative phage-related transcriptional regulator  36.51 
 
 		 88 aa  50.1  0.000009  Methylobacterium sp. 4-46  Bacteria  normal  0.447655  normal  1 
 
 
-
 
NC_011060  Ppha_0986  transcriptional regulator, XRE family  27.78 
 
 		 130 aa  48.5  0.00003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_0273  transcriptional regulator, XRE family  29.27 
 
 		 115 aa  46.2  0.0002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0604  transcriptional regulator, XRE family  32.82 
 
 		 138 aa  45.1  0.0004  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_0868  XRE family transcriptional regulator  34.45 
 
 		 263 aa  44.3  0.0006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.471001  normal  1 
 
 
-
 
NC_007484  Noc_2542  XRE family transcriptional regulator  29.91 
 
 		 165 aa  43.9  0.0007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_2413  helix-turn-helix domain-containing protein  31.93 
 
 		 129 aa  43.5  0.001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.383209  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>