Gene Pcar_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1786 
Symbol 
ID3724475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2088738 
End bp2089112 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content60% 
IMG OID637751388 
Producthelix-turn-helix transcriptional regulator 
Protein accessionYP_357197 
Protein GI77919382 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones85 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGC AGATCATCAA GAAAAACGGC CAGCCCGAGT ATGCCGTGAT TCCATATGCC 
GACTACCTGC GGCTGTTGGA GGCCTTTGAA GACAAGGCCG ATGCGGCGGC TGTGGCCGAA
TTCCAGGAGG CCTACCGGGC CGGCCGGGAG TTCCTGGTTC CTGCGGAAAT CCTCCGCCGC
GAATTGGAAG GTGATTCGCC GGTCAAGCTT TGGCGGGACT ATCGCAGCCT GACCCAGCAA
GAACTGGCCG ACCGGGCCGG TATCAGCAAG CCGTACCTGT CACAGATTGA ATCCGGTAAG
CGGCAAGGCA CGGTTGAAAC CCTTGCCGCC ATTGCTCGAG CCCTTGACGT GCCGCTGGAC
GTGATCACTG AGTGA
 
Protein sequence
MKAQIIKKNG QPEYAVIPYA DYLRLLEAFE DKADAAAVAE FQEAYRAGRE FLVPAEILRR 
ELEGDSPVKL WRDYRSLTQQ ELADRAGISK PYLSQIESGK RQGTVETLAA IARALDVPLD
VITE