Gene YPK_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1221 
Symbol 
ID6090426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1349275 
End bp1349634 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content49% 
IMG OID641596289 
ProductXRE family transcriptional regulator 
Protein accessionYP_001719972 
Protein GI170023467 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATAC AGATTATTCG TGATGGTGAG GGCAAACCAC AATATGCCGT TATGCCTTAC 
GACGAATACG AAAAGCTAGT TAACGCCAAG GATGCGTGGG AAGACGTACC CTACACGCCT
TCAAAATACG ATGAAGTAAC AGTGCCAAAC GCTGTTGTGT CAATTATGGT TGATCAGGAT
GTTTCTATCC TGGCAGCCTG GCGTATTTAT CGTGGTATGT CTCAGTACGA TGTCGCGGAA
AAGCTGGGTA CAACACAATC AACAGTTTCA CAGTGGGAGG CATCCGACCG ACCGCAGAAG
CGCACACGCG AAAAACTGGC GGCGCTGTAT GGCTGCACTC AGGAGCAACT GATCCCCTGA
 
Protein sequence
MTIQIIRDGE GKPQYAVMPY DEYEKLVNAK DAWEDVPYTP SKYDEVTVPN AVVSIMVDQD 
VSILAAWRIY RGMSQYDVAE KLGTTQSTVS QWEASDRPQK RTREKLAALY GCTQEQLIP