Gene RPC_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3072 
Symbol 
ID3972893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3404973 
End bp3405380 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content60% 
IMG OID637926180 
ProductXRE family transcriptional regulator 
Protein accessionYP_532933 
Protein GI90424563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.185071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0716873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAAAA CCGGTTCGCT CAAAAGCAAT GTTCAGTTCA TTCACGCACC TGGAGGCGAT 
CTCGCGGTGC TGTCGCGCAC CGATTATGAG CGACTGGTTG CCCTCGCGGC CGAAGCTGAA
GAAGATTCCG CAGCGAGCGA CATCGTCCGC AGTTCCAAAC GTGCGCTCAA GGAGGGCCGC
GAAGTGGCGT TGCCGAAAGC CGTGGCTGAT CGGCTCGCCA AGGGCGACAA CGCGATCCGC
GTGATCCGGG AATGGCGCGA CATGATCCAG GACGAGTTGG CCGTGGCGGT CGGCATCAGC
CAGAATTATC TGTCCGAAAT TGAGACCGGG CGGCGAAAGG GGCCAGCGGA ATTGCAGATG
AAATTTGCCC GCGCTCTCGG CGTGCCGATC GATCTTTTGA TCGAGTGA
 
Protein sequence
MAKTGSLKSN VQFIHAPGGD LAVLSRTDYE RLVALAAEAE EDSAASDIVR SSKRALKEGR 
EVALPKAVAD RLAKGDNAIR VIREWRDMIQ DELAVAVGIS QNYLSEIETG RRKGPAELQM
KFARALGVPI DLLIE