122 homologs were found in PanDaTox collection
for query gene Avi_1279 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_1279  Na+/H+ antiporter  100 
 
 
137 aa  275  1e-73  Agrobacterium vitis S4  Bacteria  normal  0.981373  n/a   
 
 
-
 
NC_012850  Rleg_1005  putative monovalent cation/H+ antiporter subunit F  59.6 
 
 
117 aa  117  4.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00000446715  normal 
 
 
-
 
NC_011369  Rleg2_0879  putative monovalent cation/H+ antiporter subunit F  61.96 
 
 
116 aa  112  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00982664  normal 
 
 
-
 
NC_008254  Meso_0869  putative monovalent cation/H+ antiporter subunit F  67.9 
 
 
111 aa  108  2.0000000000000002e-23  Chelativorans sp. BNC1  Bacteria  normal  0.0662572  n/a   
 
 
-
 
NC_009636  Smed_0612  putative monovalent cation/H+ antiporter subunit F  54.81 
 
 
128 aa  105  3e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.716984  normal 
 
 
-
 
NC_009456  VC0395_1125  putative monovalent cation/H+ antiporter subunit F  54.22 
 
 
103 aa  78.6  0.00000000000003  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000095206  n/a   
 
 
-
 
NC_013457  VEA_000414  Na(+) H(+) antiporter subunit F  50.57 
 
 
92 aa  75.9  0.0000000000002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2860  multiple resistance and pH regulation protein F  45.83 
 
 
90 aa  72  0.000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.139125  n/a   
 
 
-
 
NC_013889  TK90_0753  multiple resistance and pH regulation protein F  45.83 
 
 
91 aa  70.9  0.000000000005  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0206212  normal 
 
 
-
 
NC_009952  Dshi_0733  multiple resistance and pH regulation protein F  49.3 
 
 
118 aa  70.9  0.000000000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130974  normal 
 
 
-
 
NC_008340  Mlg_2095  multiple resistance and pH regulation protein F  44.44 
 
 
90 aa  70.1  0.00000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.801708  normal  0.210838 
 
 
-
 
NC_008609  Ppro_3223  putative monovalent cation/H+ antiporter subunit F  45.21 
 
 
91 aa  69.7  0.00000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1126  multiple resistance and pH regulation protein F  42.68 
 
 
102 aa  67.8  0.00000000004  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00913548  n/a   
 
 
-
 
NC_013946  Mrub_0865  multiple resistance and pH regulation protein F  40.74 
 
 
88 aa  67.8  0.00000000005  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.717084 
 
 
-
 
NC_011901  Tgr7_2523  multiple resistance and pH regulation protein F  46.67 
 
 
91 aa  67  0.00000000009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3690  multiple resistance and pH regulation protein F  43.33 
 
 
107 aa  65.5  0.0000000002  Jannaschia sp. CCS1  Bacteria  normal  normal  0.973299 
 
 
-
 
NC_012029  Hlac_0488  multiple resistance and pH regulation protein F  42.11 
 
 
97 aa  65.9  0.0000000002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.675094 
 
 
-
 
NC_009523  RoseRS_2097  multiple resistance and pH regulation protein F  46.58 
 
 
87 aa  65.1  0.0000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2339  putative monovalent cation/H+ antiporter subunit F  43.66 
 
 
91 aa  62.4  0.000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.962701  n/a   
 
 
-
 
NC_013743  Htur_2714  multiple resistance and pH regulation protein F  37.78 
 
 
99 aa  62.4  0.000000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008686  Pden_0701  multiple resistance and pH regulation protein F  37.5 
 
 
89 aa  61.6  0.000000004  Paracoccus denitrificans PD1222  Bacteria  normal  0.390785  normal 
 
 
-
 
NC_008789  Hhal_2030  multiple resistance and pH regulation protein F  38.03 
 
 
90 aa  61.6  0.000000004  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_0565  multiple resistance and pH regulation protein F  37.8 
 
 
96 aa  61.6  0.000000004  Halorhabdus utahensis DSM 12940  Archaea  normal  0.4041  n/a   
 
 
-
 
NC_009727  CBUD_0405  hypothetical protein  42.47 
 
 
100 aa  61.2  0.000000005  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1770  Na(+)/H(+) antiporter subunit F  42.47 
 
 
100 aa  61.2  0.000000005  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0059  putative monovalent cation/H+ antiporter subunit F  39.24 
 
 
89 aa  59.7  0.00000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2869  multiple resistance and pH regulation protein F  39.29 
 
 
93 aa  59.7  0.00000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0899  multiple resistance and pH regulation protein F  41.77 
 
 
89 aa  59.3  0.00000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.857013  n/a   
 
 
-
 
NC_009956  Dshi_3809  multiple resistance and pH regulation protein F  37.5 
 
 
89 aa  58.2  0.00000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.332403 
 
 
-
 
NC_013169  Ksed_05190  multisubunit Na+/H+ antiporter, MnhF subunit  40.28 
 
 
96 aa  56.6  0.0000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_0137  putative monovalent cation/H+ antiporter subunit F  29.73 
 
 
88 aa  55.5  0.0000002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.911502  n/a   
 
 
-
 
NC_009050  Rsph17029_3445  putative monovalent cation/H+ antiporter subunit F  37.5 
 
 
93 aa  55.5  0.0000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.735692  normal  0.139812 
 
 
-
 
NC_014158  Tpau_3718  multiple resistance and pH regulation protein F  42.47 
 
 
99 aa  55.8  0.0000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0982  multiple resistance and pH regulation protein F  31.71 
 
 
90 aa  55.8  0.0000002  Chlorobium limicola DSM 245  Bacteria  normal  0.739743  n/a   
 
 
-
 
NC_011071  Smal_3733  putative monovalent cation/H+ antiporter subunit F  33.78 
 
 
94 aa  55.5  0.0000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3719  multiple resistance and pH regulation protein F  34.38 
 
 
89 aa  55.1  0.0000003  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3853  putative monovalent cation/H+ antiporter subunit F  36.67 
 
 
89 aa  55.1  0.0000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0034  putative monovalent cation/H+ antiporter subunit F  34.41 
 
 
93 aa  55.1  0.0000003  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0079  multiple resistance and pH regulation protein F  30.49 
 
 
91 aa  55.1  0.0000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0996  pH adaption potassium efflux system, PhaF subunit  36.84 
 
 
89 aa  54.7  0.0000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0786377  n/a   
 
 
-
 
NC_009049  Rsph17029_2656  multiple resistance and pH regulation protein F  36.84 
 
 
89 aa  54.7  0.0000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1773  multiple resistance and pH regulation protein F  47.22 
 
 
87 aa  54.7  0.0000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1158  multiple resistance and pH regulation protein F  39.47 
 
 
98 aa  55.1  0.0000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0152  putative monovalent cation/H+ antiporter subunit F  34.44 
 
 
89 aa  54.3  0.0000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013926  Aboo_0385  multiple resistance and pH regulation protein F  36.36 
 
 
88 aa  54.3  0.0000006  Aciduliprofundum boonei T469  Archaea  normal  0.0828098  n/a   
 
 
-
 
NC_009428  Rsph17025_0228  multiple resistance and pH regulation protein F  36.84 
 
 
89 aa  53.5  0.0000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0106096  normal 
 
 
-
 
NC_011662  Tmz1t_1108  multiple resistance and pH regulation protein F  38.46 
 
 
139 aa  53.9  0.0000008  Thauera sp. MZ1T  Bacteria  normal  0.269645  n/a   
 
 
-
 
NC_003910  CPS_3814  putative monovalent cation/H+ antiporter subunit F  32.91 
 
 
89 aa  53.5  0.000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.345278  n/a   
 
 
-
 
NC_007494  RSP_3711  putative monovalent cation/H+ antiporter subunit F  36.25 
 
 
93 aa  53.1  0.000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.546429  n/a   
 
 
-
 
NC_011662  Tmz1t_2441  multiple resistance and pH regulation protein F  40.79 
 
 
94 aa  53.1  0.000001  Thauera sp. MZ1T  Bacteria  normal  0.770309  n/a   
 
 
-
 
NC_010725  Mpop_5152  multiple resistance and pH regulation protein F  38.67 
 
 
94 aa  52.4  0.000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3986  putative monovalent cation/H+ antiporter subunit F  34.62 
 
 
89 aa  52  0.000003  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4612  multiple resistance and pH regulation protein F  38.67 
 
 
94 aa  51.6  0.000003  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0110721 
 
 
-
 
NC_011059  Paes_0099  multiple resistance and pH regulation protein F  30.23 
 
 
90 aa  52  0.000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5077  multiple resistance and pH regulation protein F  38.67 
 
 
94 aa  51.6  0.000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.734498  normal 
 
 
-
 
NC_007406  Nwi_2658  putative monovalent cation/H+ antiporter subunit F  35 
 
 
92 aa  51.2  0.000005  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3621  putative monovalent cation/H+ antiporter subunit F  35.44 
 
 
93 aa  51.2  0.000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0308607  normal 
 
 
-
 
NC_010717  PXO_04213  putative monovalent cation/H+ antiporter subunit F  29.73 
 
 
94 aa  51.2  0.000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35420  multisubunit Na+/H+ antiporter, MnhF subunit  35.23 
 
 
155 aa  51.2  0.000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.279201 
 
 
-
 
NC_007947  Mfla_0578  putative monovalent cation/H+ antiporter subunit F  34.44 
 
 
89 aa  50.8  0.000006  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00573992  decreased coverage  0.00947424 
 
 
-
 
NC_008740  Maqu_2853  multiple resistance and pH regulation protein F  36.71 
 
 
89 aa  50.4  0.000008  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2617  hypothetical protein  41.54 
 
 
90 aa  50.1  0.00001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0665  multiple resistance and pH regulation protein F  32.88 
 
 
85 aa  49.7  0.00001  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_013440  Hoch_3536  multiple resistance and pH regulation protein F  44.44 
 
 
88 aa  50.1  0.00001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.155575  normal  0.403499 
 
 
-
 
NC_013530  Xcel_3183  multiple resistance and pH regulation protein F  35.37 
 
 
140 aa  50.1  0.00001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2488  multiple resistance and pH regulation protein F  33.33 
 
 
89 aa  50.1  0.00001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3256  putative monovalent cation/H+ antiporter subunit F  35.56 
 
 
92 aa  49.3  0.00002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111199  normal 
 
 
-
 
NC_013174  Jden_1917  multiple resistance and pH regulation protein F  42.03 
 
 
85 aa  49.3  0.00002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.851543  normal 
 
 
-
 
NC_009636  Smed_2810  putative monovalent cation/H+ antiporter subunit F  34.18 
 
 
93 aa  49.3  0.00002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.482202 
 
 
-
 
NC_004578  PSPTO_3475  potassium efflux system protein PhaF  35.56 
 
 
92 aa  48.9  0.00003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1682  putative monovalent cation/H+ antiporter subunit F  40.74 
 
 
90 aa  48.9  0.00003  Ralstonia eutropha JMP134  Bacteria  normal  0.145705  n/a   
 
 
-
 
NC_007958  RPD_0672  putative monovalent cation/H+ antiporter subunit F  34.44 
 
 
89 aa  48.5  0.00003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1006  putative monovalent cation/H+ antiporter subunit F  33.75 
 
 
92 aa  48.5  0.00003  Nitrobacter hamburgensis X14  Bacteria  normal  0.762364  n/a   
 
 
-
 
NC_008709  Ping_1354  monovalent cation/proton antiporter, pH regulation subunit F  36.71 
 
 
89 aa  48.5  0.00003  Psychromonas ingrahamii 37  Bacteria  normal  0.258998  normal 
 
 
-
 
NC_008781  Pnap_1520  multiple resistance and pH regulation protein F  39.08 
 
 
92 aa  48.1  0.00004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0106021  normal 
 
 
-
 
NC_009439  Pmen_1429  multiple resistance and pH regulation protein F  41.94 
 
 
103 aa  48.1  0.00004  Pseudomonas mendocina ymp  Bacteria  normal  0.600632  normal  0.970454 
 
 
-
 
NC_012669  Bcav_3814  multiple resistance and pH regulation protein F  26.5 
 
 
117 aa  47.4  0.00006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2435  multiple resistance and pH regulation protein F  34.48 
 
 
118 aa  47.4  0.00007  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.38947 
 
 
-
 
NC_014210  Ndas_1733  multiple resistance and pH regulation protein F  34.25 
 
 
85 aa  46.6  0.0001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3447  putative monovalent cation/H+ antiporter subunit F  35.56 
 
 
92 aa  46.6  0.0001  Pseudomonas putida W619  Bacteria  normal  0.810959  normal  0.413085 
 
 
-
 
NC_007492  Pfl01_3314  putative monovalent cation/H+ antiporter subunit F  33.33 
 
 
92 aa  45.8  0.0002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A1587  putative monovalent cation/H+ antiporter subunit F  33.33 
 
 
93 aa  46.2  0.0002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1542  putative monovalent cation/H+ antiporter subunit F  30.77 
 
 
89 aa  45.8  0.0002  Ruegeria sp. TM1040  Bacteria  normal  normal  0.0184419 
 
 
-
 
NC_009656  PSPA7_4320  putative monovalent cation/H+ antiporter subunit F  38.24 
 
 
89 aa  45.8  0.0002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.409592  n/a   
 
 
-
 
NC_009718  Fnod_1747  multiple resistance and pH regulation protein F  36.92 
 
 
95 aa  45.8  0.0002  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_26970  multisubunit Na+/H+ antiporter, MnhF subunit  35.06 
 
 
85 aa  45.4  0.0002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.44503 
 
 
-
 
NC_008752  Aave_3293  multiple resistance and pH regulation protein F  35.63 
 
 
96 aa  45.1  0.0003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.3108  normal 
 
 
-
 
NC_008782  Ajs_2478  multiple resistance and pH regulation protein F  35.8 
 
 
93 aa  45.1  0.0003  Acidovorax sp. JS42  Bacteria  normal  0.648417  normal  0.0636047 
 
 
-
 
NC_013757  Gobs_2932  multiple resistance and pH regulation protein F  35.94 
 
 
86 aa  45.1  0.0003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1211  putative monovalent cation/H+ antiporter subunit F  40.85 
 
 
85 aa  45.1  0.0003  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2858  putative monovalent cation/H+ antiporter subunit F  37.68 
 
 
91 aa  45.4  0.0003  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.780245 
 
 
-
 
NC_011662  Tmz1t_1104  multiple resistance and pH regulation protein F  38.46 
 
 
89 aa  45.1  0.0003  Thauera sp. MZ1T  Bacteria  normal  0.0102977  n/a   
 
 
-
 
NC_011992  Dtpsy_1382  multiple resistance and pH regulation protein F  35.8 
 
 
93 aa  45.1  0.0003  Acidovorax ebreus TPSY  Bacteria  normal  0.393681  n/a   
 
 
-
 
NC_012029  Hlac_0839  putative monovalent cation/H+ antiporter subunit F  34.62 
 
 
101 aa  45.1  0.0003  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_008576  Mmc1_2215  multiple resistance and pH regulation protein F  38.57 
 
 
86 aa  44.7  0.0004  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0688335 
 
 
-
 
NC_002947  PP_2226  putative monovalent cation/H+ antiporter subunit F  34.44 
 
 
92 aa  44.3  0.0005  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0504  putative monovalent cation/H+ antiporter subunit F  31.18 
 
 
93 aa  44.7  0.0005  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0667  multiple resistance and pH regulation protein F  34.29 
 
 
87 aa  44.3  0.0005  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0439  putative monovalent cation/H+ antiporter subunit F  31.18 
 
 
93 aa  44.7  0.0005  Brucella ovis ATCC 25840  Bacteria  normal  0.324734  n/a   
 
 
-
 
NC_013235  Namu_3946  multiple resistance and pH regulation protein F  36.76 
 
 
86 aa  44.3  0.0006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.109243 
 
 
-
 
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