112 homologs were found in PanDaTox collection
for query gene Smal_3733 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_3733  putative monovalent cation/H+ antiporter subunit F  100 
 
 
94 aa  186  7e-47  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_04213  putative monovalent cation/H+ antiporter subunit F  82.98 
 
 
94 aa  160  8.000000000000001e-39  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3814  putative monovalent cation/H+ antiporter subunit F  53.41 
 
 
89 aa  102  1e-21  Colwellia psychrerythraea 34H  Bacteria  normal  0.345278  n/a   
 
 
-
 
NC_007520  Tcr_0059  putative monovalent cation/H+ antiporter subunit F  55.06 
 
 
89 aa  102  1e-21  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3986  putative monovalent cation/H+ antiporter subunit F  54.95 
 
 
89 aa  102  2e-21  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_1126  multiple resistance and pH regulation protein F  62.34 
 
 
102 aa  95.9  2e-19  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00913548  n/a   
 
 
-
 
NC_007947  Mfla_0578  putative monovalent cation/H+ antiporter subunit F  50 
 
 
89 aa  92.4  2e-18  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00573992  decreased coverage  0.00947424 
 
 
-
 
NC_013173  Dbac_2488  multiple resistance and pH regulation protein F  48.31 
 
 
89 aa  89  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1682  putative monovalent cation/H+ antiporter subunit F  53.66 
 
 
90 aa  88.6  3e-17  Ralstonia eutropha JMP134  Bacteria  normal  0.145705  n/a   
 
 
-
 
NC_008709  Ping_1354  monovalent cation/proton antiporter, pH regulation subunit F  48.81 
 
 
89 aa  86.7  1e-16  Psychromonas ingrahamii 37  Bacteria  normal  0.258998  normal 
 
 
-
 
NC_007802  Jann_3719  multiple resistance and pH regulation protein F  48.31 
 
 
89 aa  85.5  2e-16  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0899  multiple resistance and pH regulation protein F  56.58 
 
 
89 aa  85.9  2e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.857013  n/a   
 
 
-
 
NC_009956  Dshi_3809  multiple resistance and pH regulation protein F  48.31 
 
 
89 aa  85.5  2e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.332403 
 
 
-
 
NC_008044  TM1040_1542  putative monovalent cation/H+ antiporter subunit F  46.07 
 
 
89 aa  85.1  3e-16  Ruegeria sp. TM1040  Bacteria  normal  normal  0.0184419 
 
 
-
 
NC_009439  Pmen_1445  multiple resistance and pH regulation protein F  46.07 
 
 
89 aa  84.7  4e-16  Pseudomonas mendocina ymp  Bacteria  normal  0.0244113  normal 
 
 
-
 
NC_009656  PSPA7_4320  putative monovalent cation/H+ antiporter subunit F  61.19 
 
 
89 aa  84.3  5e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  0.409592  n/a   
 
 
-
 
NC_009050  Rsph17029_3445  putative monovalent cation/H+ antiporter subunit F  48.31 
 
 
93 aa  82.4  0.000000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.735692  normal  0.139812 
 
 
-
 
NC_008740  Maqu_2853  multiple resistance and pH regulation protein F  46.51 
 
 
89 aa  81.6  0.000000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_5152  multiple resistance and pH regulation protein F  48 
 
 
94 aa  81.6  0.000000000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3621  putative monovalent cation/H+ antiporter subunit F  46.07 
 
 
93 aa  81.3  0.000000000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0308607  normal 
 
 
-
 
NC_012560  Avin_19570  sodium hydrogen antiporter subunitF, ShaF  50.62 
 
 
89 aa  80.9  0.000000000000006  Azotobacter vinelandii DJ  Bacteria  normal  0.256992  n/a   
 
 
-
 
NC_007404  Tbd_0493  multisubunit Na+/H+ antiporter, subunit F  61.19 
 
 
89 aa  80.5  0.000000000000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5077  multiple resistance and pH regulation protein F  46.67 
 
 
94 aa  80.5  0.000000000000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.734498  normal 
 
 
-
 
NC_010172  Mext_4612  multiple resistance and pH regulation protein F  46.67 
 
 
94 aa  80.5  0.000000000000008  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0110721 
 
 
-
 
NC_011662  Tmz1t_2441  multiple resistance and pH regulation protein F  45.74 
 
 
94 aa  79.7  0.00000000000001  Thauera sp. MZ1T  Bacteria  normal  0.770309  n/a   
 
 
-
 
NC_008686  Pden_0701  multiple resistance and pH regulation protein F  46.07 
 
 
89 aa  79.3  0.00000000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.390785  normal 
 
 
-
 
NC_007494  RSP_3711  putative monovalent cation/H+ antiporter subunit F  46.07 
 
 
93 aa  78.2  0.00000000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.546429  n/a   
 
 
-
 
NC_007964  Nham_1006  putative monovalent cation/H+ antiporter subunit F  50 
 
 
92 aa  77.8  0.00000000000004  Nitrobacter hamburgensis X14  Bacteria  normal  0.762364  n/a   
 
 
-
 
NC_009428  Rsph17025_0228  multiple resistance and pH regulation protein F  48.31 
 
 
89 aa  78.2  0.00000000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0106096  normal 
 
 
-
 
NC_008463  PA14_50690  putative monovalent cation/H+ antiporter subunit F  57.81 
 
 
85 aa  77.8  0.00000000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00854292 
 
 
-
 
NC_009636  Smed_2810  putative monovalent cation/H+ antiporter subunit F  41.18 
 
 
93 aa  77.4  0.00000000000007  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.482202 
 
 
-
 
NC_007493  RSP_0996  pH adaption potassium efflux system, PhaF subunit  47.19 
 
 
89 aa  77  0.00000000000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0786377  n/a   
 
 
-
 
NC_009049  Rsph17029_2656  multiple resistance and pH regulation protein F  47.19 
 
 
89 aa  77  0.00000000000008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2658  putative monovalent cation/H+ antiporter subunit F  46.15 
 
 
92 aa  75.9  0.0000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2478  multiple resistance and pH regulation protein F  40.43 
 
 
93 aa  75.9  0.0000000000002  Acidovorax sp. JS42  Bacteria  normal  0.648417  normal  0.0636047 
 
 
-
 
NC_011992  Dtpsy_1382  multiple resistance and pH regulation protein F  40.43 
 
 
93 aa  75.9  0.0000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.393681  n/a   
 
 
-
 
NC_002947  PP_2226  putative monovalent cation/H+ antiporter subunit F  40.43 
 
 
92 aa  72.8  0.000000000002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0152  putative monovalent cation/H+ antiporter subunit F  39.77 
 
 
89 aa  72.4  0.000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3293  multiple resistance and pH regulation protein F  37.08 
 
 
96 aa  72.4  0.000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.3108  normal 
 
 
-
 
NC_009512  Pput_3514  putative monovalent cation/H+ antiporter subunit F  40.43 
 
 
92 aa  72.4  0.000000000002  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.00558279 
 
 
-
 
NC_010322  PputGB1_1849  putative monovalent cation/H+ antiporter subunit F  40.43 
 
 
92 aa  72.4  0.000000000002  Pseudomonas putida GB-1  Bacteria  normal  0.689524  normal  0.0371902 
 
 
-
 
NC_007005  Psyr_3256  putative monovalent cation/H+ antiporter subunit F  37.08 
 
 
92 aa  71.2  0.000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111199  normal 
 
 
-
 
NC_007958  RPD_0672  putative monovalent cation/H+ antiporter subunit F  41.57 
 
 
89 aa  71.2  0.000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1520  multiple resistance and pH regulation protein F  42.86 
 
 
92 aa  71.6  0.000000000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0106021  normal 
 
 
-
 
NC_008783  BARBAKC583_0034  putative monovalent cation/H+ antiporter subunit F  46.75 
 
 
93 aa  71.2  0.000000000005  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3132  putative monovalent cation/H+ antiporter subunit F  50 
 
 
93 aa  70.1  0.000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3475  potassium efflux system protein PhaF  35.96 
 
 
92 aa  70.1  0.00000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3314  putative monovalent cation/H+ antiporter subunit F  38.2 
 
 
92 aa  69.7  0.00000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3853  putative monovalent cation/H+ antiporter subunit F  38.64 
 
 
89 aa  69.7  0.00000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A1587  putative monovalent cation/H+ antiporter subunit F  44.16 
 
 
93 aa  68.9  0.00000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3447  putative monovalent cation/H+ antiporter subunit F  39.36 
 
 
92 aa  69.3  0.00000000002  Pseudomonas putida W619  Bacteria  normal  0.810959  normal  0.413085 
 
 
-
 
NC_013158  Huta_0565  multiple resistance and pH regulation protein F  40.28 
 
 
96 aa  69.3  0.00000000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.4041  n/a   
 
 
-
 
NC_011988  Avi_5264  PH Adaption potassium efflux system  44.59 
 
 
93 aa  67.8  0.00000000005  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0504  putative monovalent cation/H+ antiporter subunit F  54.05 
 
 
93 aa  67  0.00000000008  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0439  putative monovalent cation/H+ antiporter subunit F  54.05 
 
 
93 aa  67  0.00000000008  Brucella ovis ATCC 25840  Bacteria  normal  0.324734  n/a   
 
 
-
 
NC_009952  Dshi_0733  multiple resistance and pH regulation protein F  49.28 
 
 
118 aa  67  0.00000000008  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130974  normal 
 
 
-
 
NC_008686  Pden_1285  putative monovalent cation/H+ antiporter subunit F  44.12 
 
 
93 aa  67  0.00000000009  Paracoccus denitrificans PD1222  Bacteria  normal  0.399019  normal 
 
 
-
 
NC_010002  Daci_4733  multiple resistance and pH regulation protein F  40.54 
 
 
92 aa  63.9  0.0000000008  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.74985 
 
 
-
 
NC_011662  Tmz1t_1104  multiple resistance and pH regulation protein F  48.48 
 
 
89 aa  62.8  0.000000002  Thauera sp. MZ1T  Bacteria  normal  0.0102977  n/a   
 
 
-
 
NC_012850  Rleg_1005  putative monovalent cation/H+ antiporter subunit F  39.47 
 
 
117 aa  62  0.000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00000446715  normal 
 
 
-
 
NC_012029  Hlac_0488  multiple resistance and pH regulation protein F  39.47 
 
 
97 aa  60.8  0.000000005  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.675094 
 
 
-
 
NC_012791  Vapar_1601  multiple resistance and pH regulation protein F  38.81 
 
 
92 aa  60.8  0.000000007  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3535  putative monovalent cation/H+ antiporter subunit F  50 
 
 
93 aa  60.1  0.00000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.480103  n/a   
 
 
-
 
NC_008786  Veis_3905  multiple resistance and pH regulation protein F  35.96 
 
 
92 aa  59.3  0.00000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0617372 
 
 
-
 
NC_011830  Dhaf_1158  multiple resistance and pH regulation protein F  36 
 
 
98 aa  58.9  0.00000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2714  multiple resistance and pH regulation protein F  31.94 
 
 
99 aa  57  0.00000009  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_2097  multiple resistance and pH regulation protein F  34.88 
 
 
87 aa  56.6  0.0000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3690  multiple resistance and pH regulation protein F  41.94 
 
 
107 aa  55.1  0.0000003  Jannaschia sp. CCS1  Bacteria  normal  normal  0.973299 
 
 
-
 
NC_007955  Mbur_0137  putative monovalent cation/H+ antiporter subunit F  34.33 
 
 
88 aa  55.5  0.0000003  Methanococcoides burtonii DSM 6242  Archaea  normal  0.911502  n/a   
 
 
-
 
NC_011369  Rleg2_0879  putative monovalent cation/H+ antiporter subunit F  38.24 
 
 
116 aa  55.1  0.0000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00982664  normal 
 
 
-
 
NC_010831  Cphamn1_0079  multiple resistance and pH regulation protein F  31.76 
 
 
91 aa  53.9  0.0000006  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2927  multiple resistance and pH regulation protein F  38.96 
 
 
87 aa  53.9  0.0000006  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00000965772  normal  0.611551 
 
 
-
 
NC_011059  Paes_0099  multiple resistance and pH regulation protein F  35.62 
 
 
90 aa  53.5  0.0000009  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2339  putative monovalent cation/H+ antiporter subunit F  35.44 
 
 
91 aa  53.1  0.000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.962701  n/a   
 
 
-
 
NC_008254  Meso_0869  putative monovalent cation/H+ antiporter subunit F  35.14 
 
 
111 aa  53.5  0.000001  Chelativorans sp. BNC1  Bacteria  normal  0.0662572  n/a   
 
 
-
 
NC_010803  Clim_0982  multiple resistance and pH regulation protein F  32.91 
 
 
90 aa  52  0.000003  Chlorobium limicola DSM 245  Bacteria  normal  0.739743  n/a   
 
 
-
 
NC_013926  Aboo_0385  multiple resistance and pH regulation protein F  37.68 
 
 
88 aa  51.6  0.000003  Aciduliprofundum boonei T469  Archaea  normal  0.0828098  n/a   
 
 
-
 
NC_007796  Mhun_2580  putative monovalent cation/H+ antiporter subunit F  38.1 
 
 
85 aa  51.2  0.000004  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008609  Ppro_3223  putative monovalent cation/H+ antiporter subunit F  29.87 
 
 
91 aa  51.6  0.000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1279  Na+/H+ antiporter  32.84 
 
 
137 aa  51.6  0.000004  Agrobacterium vitis S4  Bacteria  normal  0.981373  n/a   
 
 
-
 
NC_012793  GWCH70_2869  multiple resistance and pH regulation protein F  29.49 
 
 
93 aa  51.2  0.000004  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0665  multiple resistance and pH regulation protein F  37.29 
 
 
85 aa  50.8  0.000006  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009616  Tmel_1211  putative monovalent cation/H+ antiporter subunit F  35.62 
 
 
85 aa  50.8  0.000006  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2215  multiple resistance and pH regulation protein F  35.29 
 
 
86 aa  50.1  0.00001  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0688335 
 
 
-
 
NC_010483  TRQ2_1612  putative monovalent cation/H+ antiporter subunit F  36.99 
 
 
82 aa  50.1  0.00001  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000561435  n/a   
 
 
-
 
NC_009767  Rcas_1773  multiple resistance and pH regulation protein F  34.88 
 
 
87 aa  48.9  0.00002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0612  putative monovalent cation/H+ antiporter subunit F  34.33 
 
 
128 aa  47.8  0.00006  Sinorhizobium medicae WSM419  Bacteria  normal  0.716984  normal 
 
 
-
 
NC_010003  Pmob_0896  multiple resistance and pH regulation protein F  38.98 
 
 
65 aa  47  0.0001  Petrotoga mobilis SJ95  Bacteria  normal  0.297824  n/a   
 
 
-
 
NC_013441  Gbro_0667  multiple resistance and pH regulation protein F  33.33 
 
 
87 aa  45.1  0.0003  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_12110  multiple resistance and pH regulation protein F  26.39 
 
 
85 aa  45.4  0.0003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000000000991359  n/a   
 
 
-
 
NC_013946  Mrub_0865  multiple resistance and pH regulation protein F  28.79 
 
 
88 aa  45.4  0.0003  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.717084 
 
 
-
 
NC_013202  Hmuk_2858  putative monovalent cation/H+ antiporter subunit F  30 
 
 
91 aa  45.1  0.0003  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.780245 
 
 
-
 
NC_012029  Hlac_0839  putative monovalent cation/H+ antiporter subunit F  32.81 
 
 
101 aa  44.7  0.0004  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_008740  Maqu_2860  multiple resistance and pH regulation protein F  32.86 
 
 
90 aa  44.7  0.0005  Marinobacter aquaeolei VT8  Bacteria  normal  0.139125  n/a   
 
 
-
 
NC_009487  SaurJH9_0947  putative monovalent cation/H+ antiporter subunit F  34.67 
 
 
97 aa  43.9  0.0008  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0966  putative monovalent cation/H+ antiporter subunit F  34.67 
 
 
97 aa  43.9  0.0008  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.122062  n/a   
 
 
-
 
NC_002976  SERP0533  putative monovalent cation/H+ antiporter subunit F  35.71 
 
 
97 aa  43.5  0.001  Staphylococcus epidermidis RP62A  Bacteria  normal  0.567164  n/a   
 
 
-
 
NC_013131  Caci_4839  multiple resistance and pH regulation protein F  31.75 
 
 
86 aa  43.5  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.10923  normal 
 
 
-
 
NC_013235  Namu_3946  multiple resistance and pH regulation protein F  36.62 
 
 
86 aa  43.1  0.001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.109243 
 
 
-
 
NC_008942  Mlab_0949  putative monovalent cation/H+ antiporter subunit F  27.87 
 
 
86 aa  42.4  0.002  Methanocorpusculum labreanum Z  Archaea  normal  0.0187747  normal  0.214865 
 
 
-
 
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