Gene Pput_3514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3514 
Symbol 
ID5191411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3929832 
End bp3930110 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content61% 
IMG OID640587971 
Productputative monovalent cation/H+ antiporter subunit F 
Protein accessionYP_001268824 
Protein GI148548722 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00558279 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGGCC TGCTCGCCAA TGCCGTCCTC GCCAGCCTGT TCATCTTCGC CCTGGCCATG 
GGCCTGGCGC TGATCCGGCT GTTCCGTGGC CCGTCCGCCC AAGACCGCGT GCTGGCCCTG
GACTACCTGT ACATCCTGGC CATGCTCACC ATGTTGGTGC TGGGTATCCG TTATGCCAGT
GACACCTACT TCGAAGGGGC CCTGCTGATT GCACTGTTTG GTTTCGTCGG CTCGTTTGCC
TTGGCCAAGT TTCTGCTGCG CGGTGAGGTG ATCGAATGA
 
Protein sequence
MTGLLANAVL ASLFIFALAM GLALIRLFRG PSAQDRVLAL DYLYILAMLT MLVLGIRYAS 
DTYFEGALLI ALFGFVGSFA LAKFLLRGEV IE