88 homologs were found in PanDaTox collection
for query gene Vapar_1601 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_1601  multiple resistance and pH regulation protein F  100 
 
 		 92 aa  179  1e-44  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_1520  multiple resistance and pH regulation protein F  70.65 
 
 		 92 aa  133  9e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0106021  normal  1 
 
 
-
 
NC_011992  Dtpsy_1382  multiple resistance and pH regulation protein F  74.16 
 
 		 93 aa  127  6e-29  Acidovorax ebreus TPSY  Bacteria  normal  0.393681  n/a   
 
 
-
 
NC_008782  Ajs_2478  multiple resistance and pH regulation protein F  74.16 
 
 		 93 aa  127  6e-29  Acidovorax sp. JS42  Bacteria  normal  0.648417  normal  0.0636047 
 
 
-
 
NC_010002  Daci_4733  multiple resistance and pH regulation protein F  70.65 
 
 		 92 aa  127  7.000000000000001e-29  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.74985 
 
 
-
 
NC_008752  Aave_3293  multiple resistance and pH regulation protein F  68.13 
 
 		 96 aa  122  1e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.3108  normal  1 
 
 
-
 
NC_004578  PSPTO_3475  potassium efflux system protein PhaF  69.57 
 
 		 92 aa  118  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_3256  putative monovalent cation/H+ antiporter subunit F  70.65 
 
 		 92 aa  119  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111199  normal  1 
 
 
-
 
NC_007492  Pfl01_3314  putative monovalent cation/H+ antiporter subunit F  67.39 
 
 		 92 aa  117  6e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_3447  putative monovalent cation/H+ antiporter subunit F  67.39 
 
 		 92 aa  112  1.0000000000000001e-24  Pseudomonas putida W619  Bacteria  normal  0.810959  normal  0.413085 
 
 
-
 
NC_008786  Veis_3905  multiple resistance and pH regulation protein F  73.91 
 
 		 92 aa  112  1.0000000000000001e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.0617372 
 
 
-
 
NC_007614  Nmul_A1587  putative monovalent cation/H+ antiporter subunit F  60.87 
 
 		 93 aa  112  2.0000000000000002e-24  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_2226  putative monovalent cation/H+ antiporter subunit F  67.39 
 
 		 92 aa  110  7.000000000000001e-24  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_3514  putative monovalent cation/H+ antiporter subunit F  67.39 
 
 		 92 aa  109  1.0000000000000001e-23  Pseudomonas putida F1  Bacteria  normal  1  hitchhiker  0.00558279 
 
 
-
 
NC_010322  PputGB1_1849  putative monovalent cation/H+ antiporter subunit F  67.39 
 
 		 92 aa  109  1.0000000000000001e-23  Pseudomonas putida GB-1  Bacteria  normal  0.689524  normal  0.0371902 
 
 
-
 
NC_007406  Nwi_2658  putative monovalent cation/H+ antiporter subunit F  55.43 
 
 		 92 aa  102  2e-21  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_1006  putative monovalent cation/H+ antiporter subunit F  55.43 
 
 		 92 aa  101  4e-21  Nitrobacter hamburgensis X14  Bacteria  normal  0.762364  n/a   
 
 
-
 
NC_011004  Rpal_3132  putative monovalent cation/H+ antiporter subunit F  59.55 
 
 		 93 aa  99.4  2e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_2810  putative monovalent cation/H+ antiporter subunit F  54.65 
 
 		 93 aa  96.7  1e-19  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.482202 
 
 
-
 
NC_011662  Tmz1t_2441  multiple resistance and pH regulation protein F  57.32 
 
 		 94 aa  93.6  9e-19  Thauera sp. MZ1T  Bacteria  normal  0.770309  n/a   
 
 
-
 
NC_007947  Mfla_0578  putative monovalent cation/H+ antiporter subunit F  52.94 
 
 		 89 aa  90.9  5e-18  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00573992  decreased coverage  0.00947424 
 
 
-
 
NC_011988  Avi_5264  PH Adaption potassium efflux system  46.07 
 
 		 93 aa  90.9  6e-18  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_5152  multiple resistance and pH regulation protein F  49.44 
 
 		 94 aa  89.4  2e-17  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007520  Tcr_0059  putative monovalent cation/H+ antiporter subunit F  48.24 
 
 		 89 aa  87.8  4e-17  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_5077  multiple resistance and pH regulation protein F  48.31 
 
 		 94 aa  88.2  4e-17  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.734498  normal  1 
 
 
-
 
NC_010172  Mext_4612  multiple resistance and pH regulation protein F  47.19 
 
 		 94 aa  87.4  5e-17  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.0110721 
 
 
-
 
NC_009504  BOV_A0439  putative monovalent cation/H+ antiporter subunit F  55.68 
 
 		 93 aa  84.3  5e-16  Brucella ovis ATCC 25840  Bacteria  normal  0.324734  n/a   
 
 
-
 
NC_004311  BRA0504  putative monovalent cation/H+ antiporter subunit F  55.68 
 
 		 93 aa  84.3  5e-16  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_008783  BARBAKC583_0034  putative monovalent cation/H+ antiporter subunit F  42.86 
 
 		 93 aa  84  6e-16  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_0899  multiple resistance and pH regulation protein F  46.51 
 
 		 89 aa  83.2  0.000000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.857013  n/a   
 
 
-
 
NC_012560  Avin_19570  sodium hydrogen antiporter subunitF, ShaF  46.43 
 
 		 89 aa  82  0.000000000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.256992  n/a   
 
 
-
 
NC_008740  Maqu_2853  multiple resistance and pH regulation protein F  45.45 
 
 		 89 aa  82.4  0.000000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3445  putative monovalent cation/H+ antiporter subunit F  48.24 
 
 		 93 aa  81.6  0.000000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.735692  normal  0.139812 
 
 
-
 
NC_007404  Tbd_0493  multisubunit Na+/H+ antiporter, subunit F  52.24 
 
 		 89 aa  81.6  0.000000000000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_1445  multiple resistance and pH regulation protein F  48.72 
 
 		 89 aa  80.1  0.000000000000008  Pseudomonas mendocina ymp  Bacteria  normal  0.0244113  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3986  putative monovalent cation/H+ antiporter subunit F  48.05 
 
 		 89 aa  80.1  0.000000000000009  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007494  RSP_3711  putative monovalent cation/H+ antiporter subunit F  47.06 
 
 		 93 aa  80.1  0.00000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.546429  n/a   
 
 
-
 
NC_008709  Ping_1354  monovalent cation/proton antiporter, pH regulation subunit F  43.18 
 
 		 89 aa  79.3  0.00000000000001  Psychromonas ingrahamii 37  Bacteria  normal  0.258998  normal  1 
 
 
-
 
NC_009668  Oant_3535  putative monovalent cation/H+ antiporter subunit F  51.69 
 
 		 93 aa  78.6  0.00000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.480103  n/a   
 
 
-
 
NC_009429  Rsph17025_3621  putative monovalent cation/H+ antiporter subunit F  44.71 
 
 		 93 aa  78.6  0.00000000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0308607  normal  1 
 
 
-
 
NC_008686  Pden_1285  putative monovalent cation/H+ antiporter subunit F  47.78 
 
 		 93 aa  77.4  0.00000000000006  Paracoccus denitrificans PD1222  Bacteria  normal  0.399019  normal  1 
 
 
-
 
NC_003910  CPS_3814  putative monovalent cation/H+ antiporter subunit F  43.59 
 
 		 89 aa  77.4  0.00000000000006  Colwellia psychrerythraea 34H  Bacteria  normal  0.345278  n/a   
 
 
-
 
NC_007347  Reut_A1682  putative monovalent cation/H+ antiporter subunit F  48.75 
 
 		 90 aa  75.5  0.0000000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.145705  n/a   
 
 
-
 
NC_009428  Rsph17025_0228  multiple resistance and pH regulation protein F  49.41 
 
 		 89 aa  75.9  0.0000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0106096  normal  1 
 
 
-
 
NC_009956  Dshi_3809  multiple resistance and pH regulation protein F  44.19 
 
 		 89 aa  74.3  0.0000000000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.332403 
 
 
-
 
NC_009656  PSPA7_4320  putative monovalent cation/H+ antiporter subunit F  49.25 
 
 		 89 aa  74.3  0.0000000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.409592  n/a   
 
 
-
 
NC_008044  TM1040_1542  putative monovalent cation/H+ antiporter subunit F  38.37 
 
 		 89 aa  73.2  0.000000000001  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.0184419 
 
 
-
 
NC_013173  Dbac_2488  multiple resistance and pH regulation protein F  42.35 
 
 		 89 aa  73.2  0.000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_007493  RSP_0996  pH adaption potassium efflux system, PhaF subunit  47.06 
 
 		 89 aa  72.4  0.000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0786377  n/a   
 
 
-
 
NC_009049  Rsph17029_2656  multiple resistance and pH regulation protein F  47.06 
 
 		 89 aa  72.4  0.000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_3719  multiple resistance and pH regulation protein F  41.86 
 
 		 89 aa  72  0.000000000003  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013422  Hneap_1126  multiple resistance and pH regulation protein F  40 
 
 		 102 aa  71.6  0.000000000003  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00913548  n/a   
 
 
-
 
NC_008463  PA14_50690  putative monovalent cation/H+ antiporter subunit F  49.21 
 
 		 85 aa  71.2  0.000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.00854292 
 
 
-
 
NC_008686  Pden_0701  multiple resistance and pH regulation protein F  40.7 
 
 		 89 aa  68.9  0.00000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.390785  normal  1 
 
 
-
 
NC_007778  RPB_0152  putative monovalent cation/H+ antiporter subunit F  43.59 
 
 		 89 aa  68.6  0.00000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_3853  putative monovalent cation/H+ antiporter subunit F  41.98 
 
 		 89 aa  65.9  0.0000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1158  multiple resistance and pH regulation protein F  35.96 
 
 		 98 aa  65.5  0.0000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_3733  putative monovalent cation/H+ antiporter subunit F  38.46 
 
 		 94 aa  64.7  0.0000000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_04213  putative monovalent cation/H+ antiporter subunit F  38.96 
 
 		 94 aa  63.9  0.0000000008  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_1104  multiple resistance and pH regulation protein F  43.02 
 
 		 89 aa  62.8  0.000000002  Thauera sp. MZ1T  Bacteria  normal  0.0102977  n/a   
 
 
-
 
NC_012793  GWCH70_2869  multiple resistance and pH regulation protein F  39.51 
 
 		 93 aa  61.2  0.000000005  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_0672  putative monovalent cation/H+ antiporter subunit F  41.56 
 
 		 89 aa  58.2  0.00000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007796  Mhun_2580  putative monovalent cation/H+ antiporter subunit F  36.49 
 
 		 85 aa  52.4  0.000002  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_010831  Cphamn1_0079  multiple resistance and pH regulation protein F  27.71 
 
 		 91 aa  51.6  0.000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013743  Htur_2714  multiple resistance and pH regulation protein F  33.7 
 
 		 99 aa  51.2  0.000005  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011059  Paes_0099  multiple resistance and pH regulation protein F  28.4 
 
 		 90 aa  51.2  0.000005  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_0733  multiple resistance and pH regulation protein F  37.14 
 
 		 118 aa  49.3  0.00002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130974  normal  1 
 
 
-
 
NC_010803  Clim_0982  multiple resistance and pH regulation protein F  32.05 
 
 		 90 aa  48.5  0.00003  Chlorobium limicola DSM 245  Bacteria  normal  0.739743  n/a   
 
 
-
 
NC_013158  Huta_0565  multiple resistance and pH regulation protein F  26.19 
 
 		 96 aa  48.5  0.00003  Halorhabdus utahensis DSM 12940  Archaea  normal  0.4041  n/a   
 
 
-
 
NC_013926  Aboo_0665  multiple resistance and pH regulation protein F  33.78 
 
 		 85 aa  48.9  0.00003  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2097  multiple resistance and pH regulation protein F  35 
 
 		 87 aa  48.1  0.00004  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013926  Aboo_0385  multiple resistance and pH regulation protein F  33.78 
 
 		 88 aa  47.4  0.00007  Aciduliprofundum boonei T469  Archaea  normal  0.0828098  n/a   
 
 
-
 
NC_013521  Sked_26970  multisubunit Na+/H+ antiporter, MnhF subunit  32.1 
 
 		 85 aa  45.8  0.0002  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.44503 
 
 
-
 
NC_008576  Mmc1_2215  multiple resistance and pH regulation protein F  31.43 
 
 		 86 aa  45.8  0.0002  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.0688335 
 
 
-
 
NC_007802  Jann_3690  multiple resistance and pH regulation protein F  28.72 
 
 		 107 aa  45.4  0.0003  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.973299 
 
 
-
 
NC_009767  Rcas_1773  multiple resistance and pH regulation protein F  32.5 
 
 		 87 aa  44.7  0.0004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_2927  multiple resistance and pH regulation protein F  29.33 
 
 		 87 aa  45.1  0.0004  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00000965772  normal  0.611551 
 
 
-
 
NC_002976  SERP0533  putative monovalent cation/H+ antiporter subunit F  29.63 
 
 		 97 aa  44.3  0.0005  Staphylococcus epidermidis RP62A  Bacteria  normal  0.567164  n/a   
 
 
-
 
NC_009487  SaurJH9_0947  putative monovalent cation/H+ antiporter subunit F  32.43 
 
 		 97 aa  43.9  0.0008  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_0966  putative monovalent cation/H+ antiporter subunit F  32.43 
 
 		 97 aa  43.9  0.0008  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.122062  n/a   
 
 
-
 
NC_014158  Tpau_3718  multiple resistance and pH regulation protein F  36.99 
 
 		 99 aa  42.7  0.002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_0137  putative monovalent cation/H+ antiporter subunit F  26.19 
 
 		 88 aa  42.7  0.002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.911502  n/a   
 
 
-
 
NC_012029  Hlac_0488  multiple resistance and pH regulation protein F  29.17 
 
 		 97 aa  41.6  0.004  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  normal  0.675094 
 
 
-
 
NC_002939  GSU2339  putative monovalent cation/H+ antiporter subunit F  35.8 
 
 		 91 aa  41.6  0.004  Geobacter sulfurreducens PCA  Bacteria  normal  0.962701  n/a   
 
 
-
 
NC_008942  Mlab_0949  putative monovalent cation/H+ antiporter subunit F  34.15 
 
 		 86 aa  41.2  0.005  Methanocorpusculum labreanum Z  Archaea  normal  0.0187747  normal  0.214865 
 
 
-
 
NC_009921  Franean1_5210  hypothetical protein  37.97 
 
 		 88 aa  40.8  0.006  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.0000708898  normal  1 
 
 
-
 
NC_008609  Ppro_3223  putative monovalent cation/H+ antiporter subunit F  33.77 
 
 		 91 aa  40.8  0.007  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009456  VC0395_1125  putative monovalent cation/H+ antiporter subunit F  32.14 
 
 		 103 aa  40.4  0.008  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000095206  n/a   
 
 
-
 
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