Gene Avin_19570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19570 
SymbolshaF 
ID7760889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1950633 
End bp1950902 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content66% 
IMG OID643804857 
Productsodium hydrogen antiporter subunitF, ShaF 
Protein accessionYP_002799141 
Protein GI226944068 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.256992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCCC ACGTGATTCC CTTCTGCCTG GCGGTCATCG GCCTGGCCAT GATCCTCAAC 
CTGGTGCGCC TGATCCGCGG GCCGAGTCCG GCGGATCGCA TCCTGGCGCT GGACACCCTG
TACATCAACG CCCTGGCGCT GATCGTGCTG CTCGGCATCC GGCAGGCCTC GGAACTGTTT
TTCGAAGCGG CGCTGCTGAT CGCGGCGATG GGTTTCGTCG GCACCGTGGC GGCCGGCAAG
TACCTGTCGC GCGGCGATAT CCTCGACTAG
 
Protein sequence
MLAHVIPFCL AVIGLAMILN LVRLIRGPSP ADRILALDTL YINALALIVL LGIRQASELF 
FEAALLIAAM GFVGTVAAGK YLSRGDILD