92 homologs were found in PanDaTox collection
for query gene RPC_3853 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_3853  putative monovalent cation/H+ antiporter subunit F  100 
 
 		 89 aa  169  9e-42  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0152  putative monovalent cation/H+ antiporter subunit F  83.15 
 
 		 89 aa  146  1.0000000000000001e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_0672  putative monovalent cation/H+ antiporter subunit F  84.27 
 
 		 89 aa  135  3.0000000000000003e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009956  Dshi_3809  multiple resistance and pH regulation protein F  50.56 
 
 		 89 aa  95.1  3e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.332403 
 
 
-
 
NC_008740  Maqu_2853  multiple resistance and pH regulation protein F  52.81 
 
 		 89 aa  94.4  5e-19  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_3719  multiple resistance and pH regulation protein F  49.44 
 
 		 89 aa  94.4  5e-19  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0899  multiple resistance and pH regulation protein F  50.56 
 
 		 89 aa  94  6e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.857013  n/a   
 
 
-
 
NC_003910  CPS_3814  putative monovalent cation/H+ antiporter subunit F  52.81 
 
 		 89 aa  93.6  8e-19  Colwellia psychrerythraea 34H  Bacteria  normal  0.345278  n/a   
 
 
-
 
NC_013173  Dbac_2488  multiple resistance and pH regulation protein F  52.81 
 
 		 89 aa  92.4  2e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3986  putative monovalent cation/H+ antiporter subunit F  54.43 
 
 		 89 aa  91.7  3e-18  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013422  Hneap_1126  multiple resistance and pH regulation protein F  51.69 
 
 		 102 aa  90.9  5e-18  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00913548  n/a   
 
 
-
 
NC_007947  Mfla_0578  putative monovalent cation/H+ antiporter subunit F  52.81 
 
 		 89 aa  90.1  8e-18  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00573992  decreased coverage  0.00947424 
 
 
-
 
NC_007520  Tcr_0059  putative monovalent cation/H+ antiporter subunit F  46.07 
 
 		 89 aa  85.9  2e-16  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_1542  putative monovalent cation/H+ antiporter subunit F  42.7 
 
 		 89 aa  83.2  0.000000000000001  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.0184419 
 
 
-
 
NC_009428  Rsph17025_0228  multiple resistance and pH regulation protein F  50.56 
 
 		 89 aa  81.6  0.000000000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0106096  normal  1 
 
 
-
 
NC_009049  Rsph17029_2656  multiple resistance and pH regulation protein F  50.56 
 
 		 89 aa  81.6  0.000000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0996  pH adaption potassium efflux system, PhaF subunit  50.56 
 
 		 89 aa  81.6  0.000000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0786377  n/a   
 
 
-
 
NC_009439  Pmen_1445  multiple resistance and pH regulation protein F  48.05 
 
 		 89 aa  81.3  0.000000000000004  Pseudomonas mendocina ymp  Bacteria  normal  0.0244113  normal  1 
 
 
-
 
NC_007404  Tbd_0493  multisubunit Na+/H+ antiporter, subunit F  56.72 
 
 		 89 aa  79.3  0.00000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_1354  monovalent cation/proton antiporter, pH regulation subunit F  44.94 
 
 		 89 aa  79.7  0.00000000000001  Psychromonas ingrahamii 37  Bacteria  normal  0.258998  normal  1 
 
 
-
 
NC_012560  Avin_19570  sodium hydrogen antiporter subunitF, ShaF  50 
 
 		 89 aa  77  0.00000000000008  Azotobacter vinelandii DJ  Bacteria  normal  0.256992  n/a   
 
 
-
 
NC_007347  Reut_A1682  putative monovalent cation/H+ antiporter subunit F  51.39 
 
 		 90 aa  75.1  0.0000000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.145705  n/a   
 
 
-
 
NC_008686  Pden_0701  multiple resistance and pH regulation protein F  42.7 
 
 		 89 aa  75.1  0.0000000000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.390785  normal  1 
 
 
-
 
NC_009656  PSPA7_4320  putative monovalent cation/H+ antiporter subunit F  52.24 
 
 		 89 aa  74.3  0.0000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.409592  n/a   
 
 
-
 
NC_009636  Smed_2810  putative monovalent cation/H+ antiporter subunit F  41.18 
 
 		 93 aa  74.3  0.0000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.482202 
 
 
-
 
NC_011662  Tmz1t_1104  multiple resistance and pH regulation protein F  50.79 
 
 		 89 aa  74.3  0.0000000000005  Thauera sp. MZ1T  Bacteria  normal  0.0102977  n/a   
 
 
-
 
NC_008463  PA14_50690  putative monovalent cation/H+ antiporter subunit F  53.97 
 
 		 85 aa  73.6  0.0000000000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.00854292 
 
 
-
 
NC_007614  Nmul_A1587  putative monovalent cation/H+ antiporter subunit F  40.45 
 
 		 93 aa  73.6  0.000000000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_04213  putative monovalent cation/H+ antiporter subunit F  39.77 
 
 		 94 aa  72  0.000000000003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_3132  putative monovalent cation/H+ antiporter subunit F  42.35 
 
 		 93 aa  70.5  0.000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_3733  putative monovalent cation/H+ antiporter subunit F  38.64 
 
 		 94 aa  69.7  0.00000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_2658  putative monovalent cation/H+ antiporter subunit F  48.53 
 
 		 92 aa  69.3  0.00000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_1382  multiple resistance and pH regulation protein F  41.46 
 
 		 93 aa  69.3  0.00000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.393681  n/a   
 
 
-
 
NC_008782  Ajs_2478  multiple resistance and pH regulation protein F  41.46 
 
 		 93 aa  69.3  0.00000000002  Acidovorax sp. JS42  Bacteria  normal  0.648417  normal  0.0636047 
 
 
-
 
NC_011662  Tmz1t_2441  multiple resistance and pH regulation protein F  40.45 
 
 		 94 aa  68.6  0.00000000003  Thauera sp. MZ1T  Bacteria  normal  0.770309  n/a   
 
 
-
 
NC_007492  Pfl01_3314  putative monovalent cation/H+ antiporter subunit F  40.45 
 
 		 92 aa  67.4  0.00000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_3256  putative monovalent cation/H+ antiporter subunit F  39.33 
 
 		 92 aa  67.4  0.00000000007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111199  normal  1 
 
 
-
 
NC_004578  PSPTO_3475  potassium efflux system protein PhaF  39.33 
 
 		 92 aa  67  0.00000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_1006  putative monovalent cation/H+ antiporter subunit F  45.59 
 
 		 92 aa  65.5  0.0000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.762364  n/a   
 
 
-
 
NC_008781  Pnap_1520  multiple resistance and pH regulation protein F  40.24 
 
 		 92 aa  64.7  0.0000000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0106021  normal  1 
 
 
-
 
NC_010725  Mpop_5152  multiple resistance and pH regulation protein F  45.59 
 
 		 94 aa  64.3  0.0000000006  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009050  Rsph17029_3445  putative monovalent cation/H+ antiporter subunit F  38.96 
 
 		 93 aa  63.9  0.0000000007  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.735692  normal  0.139812 
 
 
-
 
NC_012793  GWCH70_2869  multiple resistance and pH regulation protein F  43.9 
 
 		 93 aa  63.2  0.000000001  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_5077  multiple resistance and pH regulation protein F  45.59 
 
 		 94 aa  63.2  0.000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.734498  normal  1 
 
 
-
 
NC_010501  PputW619_3447  putative monovalent cation/H+ antiporter subunit F  40.45 
 
 		 92 aa  63.2  0.000000001  Pseudomonas putida W619  Bacteria  normal  0.810959  normal  0.413085 
 
 
-
 
NC_010172  Mext_4612  multiple resistance and pH regulation protein F  45.59 
 
 		 94 aa  63.2  0.000000001  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.0110721 
 
 
-
 
NC_007494  RSP_3711  putative monovalent cation/H+ antiporter subunit F  38.96 
 
 		 93 aa  63.2  0.000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.546429  n/a   
 
 
-
 
NC_008752  Aave_3293  multiple resistance and pH regulation protein F  39.02 
 
 		 96 aa  62.8  0.000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.3108  normal  1 
 
 
-
 
NC_002947  PP_2226  putative monovalent cation/H+ antiporter subunit F  40.45 
 
 		 92 aa  62  0.000000002  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009429  Rsph17025_3621  putative monovalent cation/H+ antiporter subunit F  37.66 
 
 		 93 aa  62  0.000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0308607  normal  1 
 
 
-
 
NC_011988  Avi_5264  PH Adaption potassium efflux system  44.78 
 
 		 93 aa  62  0.000000002  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_3514  putative monovalent cation/H+ antiporter subunit F  40.45 
 
 		 92 aa  61.6  0.000000004  Pseudomonas putida F1  Bacteria  normal  1  hitchhiker  0.00558279 
 
 
-
 
NC_010322  PputGB1_1849  putative monovalent cation/H+ antiporter subunit F  40.45 
 
 		 92 aa  61.6  0.000000004  Pseudomonas putida GB-1  Bacteria  normal  0.689524  normal  0.0371902 
 
 
-
 
NC_012791  Vapar_1601  multiple resistance and pH regulation protein F  43.28 
 
 		 92 aa  61.6  0.000000004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008686  Pden_1285  putative monovalent cation/H+ antiporter subunit F  44.12 
 
 		 93 aa  59.3  0.00000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.399019  normal  1 
 
 
-
 
NC_012850  Rleg_1005  putative monovalent cation/H+ antiporter subunit F  46.48 
 
 		 117 aa  59.3  0.00000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00000446715  normal  1 
 
 
-
 
NC_011369  Rleg2_0879  putative monovalent cation/H+ antiporter subunit F  47.83 
 
 		 116 aa  59.3  0.00000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00982664  normal  1 
 
 
-
 
NC_008783  BARBAKC583_0034  putative monovalent cation/H+ antiporter subunit F  35.29 
 
 		 93 aa  57.4  0.00000007  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_4733  multiple resistance and pH regulation protein F  40.3 
 
 		 92 aa  57  0.00000008  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.74985 
 
 
-
 
NC_011830  Dhaf_1158  multiple resistance and pH regulation protein F  38.16 
 
 		 98 aa  56.2  0.0000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013158  Huta_0565  multiple resistance and pH regulation protein F  33.33 
 
 		 96 aa  56.2  0.0000001  Halorhabdus utahensis DSM 12940  Archaea  normal  0.4041  n/a   
 
 
-
 
NC_008254  Meso_0869  putative monovalent cation/H+ antiporter subunit F  45.59 
 
 		 111 aa  55.5  0.0000002  Chelativorans sp. BNC1  Bacteria  normal  0.0662572  n/a   
 
 
-
 
NC_009504  BOV_A0439  putative monovalent cation/H+ antiporter subunit F  45.59 
 
 		 93 aa  54.7  0.0000005  Brucella ovis ATCC 25840  Bacteria  normal  0.324734  n/a   
 
 
-
 
NC_004311  BRA0504  putative monovalent cation/H+ antiporter subunit F  45.59 
 
 		 93 aa  54.7  0.0000005  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_3905  multiple resistance and pH regulation protein F  42.03 
 
 		 92 aa  53.5  0.0000009  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.0617372 
 
 
-
 
NC_009668  Oant_3535  putative monovalent cation/H+ antiporter subunit F  47.06 
 
 		 93 aa  53.1  0.000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.480103  n/a   
 
 
-
 
NC_011059  Paes_0099  multiple resistance and pH regulation protein F  38.75 
 
 		 90 aa  52.8  0.000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012029  Hlac_0488  multiple resistance and pH regulation protein F  38.75 
 
 		 97 aa  52.8  0.000002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  normal  0.675094 
 
 
-
 
NC_009636  Smed_0612  putative monovalent cation/H+ antiporter subunit F  43.06 
 
 		 128 aa  52.4  0.000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.716984  normal  1 
 
 
-
 
NC_013743  Htur_2714  multiple resistance and pH regulation protein F  33.33 
 
 		 99 aa  51.6  0.000004  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013889  TK90_0753  multiple resistance and pH regulation protein F  33.71 
 
 		 91 aa  50.1  0.00001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0206212  normal  1 
 
 
-
 
NC_010831  Cphamn1_0079  multiple resistance and pH regulation protein F  40.28 
 
 		 91 aa  48.9  0.00002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010803  Clim_0982  multiple resistance and pH regulation protein F  34.62 
 
 		 90 aa  49.3  0.00002  Chlorobium limicola DSM 245  Bacteria  normal  0.739743  n/a   
 
 
-
 
NC_011989  Avi_1279  Na+/H+ antiporter  37.21 
 
 		 137 aa  48.5  0.00003  Agrobacterium vitis S4  Bacteria  normal  0.981373  n/a   
 
 
-
 
NC_013926  Aboo_0385  multiple resistance and pH regulation protein F  36.25 
 
 		 88 aa  47  0.00008  Aciduliprofundum boonei T469  Archaea  normal  0.0828098  n/a   
 
 
-
 
NC_010003  Pmob_0896  multiple resistance and pH regulation protein F  35 
 
 		 65 aa  47  0.00009  Petrotoga mobilis SJ95  Bacteria  normal  0.297824  n/a   
 
 
-
 
NC_013521  Sked_26970  multisubunit Na+/H+ antiporter, MnhF subunit  27.85 
 
 		 85 aa  46.2  0.0001  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.44503 
 
 
-
 
NC_008340  Mlg_2095  multiple resistance and pH regulation protein F  26.74 
 
 		 90 aa  46.2  0.0001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.801708  normal  0.210838 
 
 
-
 
NC_014210  Ndas_1733  multiple resistance and pH regulation protein F  32.91 
 
 		 85 aa  46.2  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_11090  multisubunit Na+/H+ antiporter, MnhF subunit  31.65 
 
 		 94 aa  45.1  0.0003  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_0733  multiple resistance and pH regulation protein F  30.95 
 
 		 118 aa  45.1  0.0004  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130974  normal  1 
 
 
-
 
NC_008609  Ppro_3223  putative monovalent cation/H+ antiporter subunit F  33.33 
 
 		 91 aa  44.3  0.0005  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_4839  multiple resistance and pH regulation protein F  35.06 
 
 		 86 aa  44.7  0.0005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.10923  normal  1 
 
 
-
 
NC_012669  Bcav_3814  multiple resistance and pH regulation protein F  28.99 
 
 		 117 aa  43.9  0.0008  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009718  Fnod_1747  multiple resistance and pH regulation protein F  30.77 
 
 		 95 aa  42.7  0.002  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008789  Hhal_2030  multiple resistance and pH regulation protein F  27.91 
 
 		 90 aa  42.7  0.002  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_2523  multiple resistance and pH regulation protein F  34.38 
 
 		 91 aa  42  0.003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0502  multiple resistance and pH regulation protein F  19.77 
 
 		 87 aa  41.6  0.003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  unclonable  0.0000000000000119623  hitchhiker  0.0000653225 
 
 
-
 
NC_010483  TRQ2_1612  putative monovalent cation/H+ antiporter subunit F  29.87 
 
 		 82 aa  42  0.003  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000561435  n/a   
 
 
-
 
NC_013174  Jden_1917  multiple resistance and pH regulation protein F  30.43 
 
 		 85 aa  40.8  0.006  Jonesia denitrificans DSM 20603  Bacteria  normal  0.851543  normal  1 
 
 
-
 
NC_013202  Hmuk_2858  putative monovalent cation/H+ antiporter subunit F  30.14 
 
 		 91 aa  40.4  0.009  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  0.780245 
 
 
-
 
NC_007955  Mbur_0137  putative monovalent cation/H+ antiporter subunit F  30 
 
 		 88 aa  40  0.01  Methanococcoides burtonii DSM 6242  Archaea  normal  0.911502  n/a   
 
 
-
 
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